DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and myo2

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_588114.1 Gene:myo2 / 2539513 PomBaseID:SPCC645.05c Length:1526 Species:Schizosaccharomyces pombe


Alignment Length:745 Identity:165/745 - (22%)
Similarity:309/745 - (41%) Gaps:156/745 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAELL 101
            |.|.::::..::|.....::..:.::||.|.|.                     :.|.:.::|||
pombe   882 LRRTQERLANIEDSFSETKQQNENLQRESASLK---------------------QINNELESELL 925

  Fly   102 KLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIES 166
            :....:|.:..|..|....|..:..::: |.:.::|.|.:|.|....:||:|..:...|...|.:
pombe   926 EKTSKVETLLSEQNELKEKLSLEEKDLL-DTKGELESLRENNATVLSEKAEFNEQCKSLQETIVT 989

  Fly   167 YNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRS-------RLSQENIELTKDVQDLK 224
            .:.|.....|:||..:..|.|:.:..:::|...|......|       :|.:||..|..||..||
pombe   990 KDAELDKLTKYISDYKTEIQEMRLTNQKMNEKSIQQEGSLSESLKRVKKLERENSTLISDVSILK 1054

  Fly   225 VQLDTVSFSK---SQVISQLEDARRRLEDEDRRRSLLESSLHQVE-----IELDSVRNQLEEESE 281
            .|.:.:|..|   ...|:.||:....||.:.::...|:..|..:.     .:|.:.:|   :|.|
pombe  1055 QQKEELSVLKGVQELTINNLEEKVNYLEADVKQLPKLKKELESLNDKDQLYQLQATKN---KELE 1116

  Fly   282 ARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQ------VRITELEEHIESLIVKV 340
            |::                 .:..:.:.:..:|:|....|.|      ::..||:|..|:|::||
pombe  1117 AKV-----------------KECLNNIKSLTKELENKEEKCQNLSDASLKYIELQEIHENLLLKV 1164

  Fly   341 NNLEKMKTRLASEVEVLIIDLE---KSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRD 402
            ::||..|    .:.|.|.:|||   ..:.:.:||:|      ||                   ||
pombe  1165 SDLENYK----KKYEGLQLDLEGLKDVDTNFQELSK------KH-------------------RD 1200

  Fly   403 LKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELN---RRLHELELELRRLEN 464
            |...|..|:|   :....|:..:..:.|||.|.:.:......:|||:   .::.|||.::..|.:
pombe  1201 LTFNHESLLR---QSASYKEKLSLASSENKDLSNKVSSLTKQVNELSPKASKVPELERKITNLMH 1262

  Fly   465 ERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIE-QLNA 528
            |..:|         |:..|:::.:.|.|.    |.:.|.|..:  .|:|:.||   :|:| |...
pombe  1263 EYSQL---------GKTFEDEKRKALIAS----RDNEELRSLK--SELESKRK---LEVEYQKVL 1309

  Fly   529 RVIEAETRLKTEVTRIKKK------LQIQITELEMSL-DVANKTNIDLQKVIKKQSLQLTELQAH 586
            ..::....|::|||.::.|      ::.:::|:||.| |...:.|..|.. .||:..::..|:.|
pombe  1310 EEVKTTRSLRSEVTLLRNKVADHESIRSKLSEVEMKLVDTRKELNSALDS-CKKREAEIHRLKEH 1373

  Fly   587 --------------YEDVQRQLQATLDQYAVAQRRLAGLNGEL-EEVRSHLDSANRAKRTVELQY 636
                          .|.|.:.:......:.:.||   ..|..| |.::...|..|..|..:|.| 
pombe  1374 RPSGKENNIPAVKTTEPVLKNIPQRKTIFDLQQR---NANQALYENLKRDYDRLNLEKHNLEKQ- 1434

  Fly   637 EEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHE 701
                  :|||..|.||.......|:......|.:.:.:..::.....:...|||:.:   ::..|
pombe  1435 ------VNELKGAEVSPQPTGQSLQHVNLAHAIELKALKDQINSEKAKMFSVQVQYE---KREQE 1490

  Fly   702 EQERIVKLETIKKSLEVEVKNLSIRLEEVE 731
            .|:||..||.:.|...::|:.|..|:..:|
pombe  1491 LQKRIASLEKVNKDSLIDVRALRDRIASLE 1520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 165/745 (22%)
myo2NP_588114.1 COG5022 6..1516 CDD:227355 163/739 (22%)
Myosin_N 25..>48 CDD:280832
MYSc_class_II 91..743 CDD:276951
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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