DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and Myh8

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_001093955.1 Gene:Myh8 / 252942 RGDID:620356 Length:1937 Species:Rattus norvegicus


Alignment Length:825 Identity:294/825 - (35%)
Similarity:491/825 - (59%) Gaps:1/825 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRK 95
            ||....:..|:.:|..|::::|.||..|.:.|::::|||.::.::|||||||.|....|.|.|:|
  Rat  1105 IQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVELNKK 1169

  Fly    96 RDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYEL 160
            |:.|..|||:.||:..|:.|.|:..|:|||.:.:.:..||::.|.:.|.:.||:|::.:.|:.:|
  Rat  1170 RETEFQKLRRDLEEATLQHEATSAALRKKHADSMAELGEQIDNLQRVKQKLEKEKSELKMEIDDL 1234

  Fly   161 LSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKV 225
            .|..|:..|.|...||....||..:|||..|.||..|.:.::::.|:||..|..|.::.:.:...
  Rat  1235 SSNAEAIAKAKGNLEKMCRTLEDQVSELKSKEEEQQRLINELTAQRARLQTEAGEYSRQLDEKDA 1299

  Fly   226 QLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQL 290
            .:..:|.||.....|:|:.:|:||:|.:.::.|..:|.....:.|.:|.|.|||.|.:.:|:|.|
  Rat  1300 LVSQLSRSKQASTQQIEELKRQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRAL 1364

  Fly   291 VKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVE 355
            .|||::...|:.|:.::...|.||:||.::|...|:...|||:|::..|..:|||.|.||.:|||
  Rat  1365 SKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVE 1429

  Fly   356 VLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKV 420
            .|::|:|::|.:|..|.|.....:|...|.:.:.:||....|:.|::.:....:|.:..:..::.
  Rat  1430 DLMLDVERTNAACAALDKKQRNFDKVLSEWRQKYEETQAELESCQKESRTLSTELFKVKNAYEES 1494

  Fly   421 KDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQ 485
            .|....|.||||.|..::.:....|.|..:.:||||...:::|.|:.|:.||.:||||..:.||.
  Rat  1495 LDQLETLRRENKNLQQEISDLTEQIAEGGKHIHELEKIKKQVEQEKCEIQAALEEAEASLEHEEG 1559

  Fly   486 RGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQI 550
            :..|:..:.||.:.:.:|::|||||||:.: |:..|.:.:.....::||.|.:.:..|:|||::.
  Rat  1560 KILRIQLELNQVKSEIDRKIAEKDEEIDQL-KRNHIRVVETMQSTLDAEIRSRNDALRVKKKMEG 1623

  Fly   551 QITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGEL 615
            .:.|:|:.|:.||:...:..:..:.....|.:.|.|.:|..|..:...:|.|:.:||...|..|:
  Rat  1624 DLNEMEIQLNHANRLAAESLRNYRNTQGILKDTQLHLDDALRGQEDLKEQLAIVERRANLLQAEI 1688

  Fly   616 EEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRI 680
            ||:|:.|:...|:::..|.:..:|:.|:..|.|.|.||::.|.|||.::|.:.|:.|||.:|.|.
  Rat  1689 EELRATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEEVIQESRN 1753

  Fly   681 SDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKL 745
            ::|:.:|...:...:.|::.:||:....||.:||:||..||:|..||:|.|..|:.|.|:.|.||
  Rat  1754 AEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKL 1818

  Fly   746 EARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRR 810
            |||:|:||.|:|.|::|:||.:|.|||.||.|||:..|.|||:||::.|||.:||..||:..|:|
  Rat  1819 EARVRELEGEVENEQKRNAEAVKGLRKHERRVKELTYQTEEDRKNVLRLQDLVDKLQAKVKSYKR 1883

  Fly   811 QLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            |..|.|..|.....:.|:.|.|||.||:|||.|||.:|.:|.|.|
  Rat  1884 QAEEAEEQSNVNLAKFRKLQHELEEAEERADIAESQVNKLRVKSR 1928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 290/818 (35%)
Myh8NP_001093955.1 Myosin_N 35..79 CDD:460670
Motor_domain 102..769 CDD:473979
Myosin_tail_1 849..1926 CDD:460256 292/821 (36%)
Blue background indicates that the domain is not in the aligned region.

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