DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myo-2

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_510092.2 Gene:myo-2 / 181404 WormBaseID:WBGene00003514 Length:1947 Species:Caenorhabditis elegans


Alignment Length:815 Identity:267/815 - (32%)
Similarity:454/815 - (55%) Gaps:1/815 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAELLKLRK 105
            |.:::.|.|.|..|::.|||.:|.:||...:..:::|:||:.......|.|..:|:||||.|||:
 Worm  1128 EARVKDLHDQLADEKDARQRADRSRADQQAEYDELTEQLEDQARATAAQIELGKKKDAELTKLRR 1192

  Fly   106 LLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIESYNKE 170
            .||:..|:..|...:||||.::.|.:..:|:|.|.|.|.|.||:|...|.|..|..:.::...|.
 Worm  1193 DLEESGLKFGEQLTVLKKKGSDAIQELSDQIEQLQKQKGRIEKEKGHMQREFDESSAALDQEAKL 1257

  Fly   171 KIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVSFSKS 235
            :...|:.....||.:.||.:|.:|.:|.:.|..|.:.||:.||.:|.:.|::|:.::...:..|.
 Worm  1258 RADQERIAKGYEVRLLELRLKADEQSRQLQDFVSSKGRLNSENSDLARQVEELEAKIQAANRLKL 1322

  Fly   236 QVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANADATSW 300
            |..::|:.|:|:.|:|.|.|..|.:....:..||:.::..:|:|...:.:..|||.||:.:...|
 Worm  1323 QFSNELDHAKRQAEEESRERQNLSNLSKNLARELEQLKESIEDEVAGKNEASRQLSKASVELDQW 1387

  Fly   301 QNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSN 365
            :.|:.:|....|:|.:|::::...:.:|:::.:::...|:..||..::||.:|.:...::.|...
 Worm  1388 RTKFETEGLIGADEFDEVKKRQNQKTSEIQDALDACNAKIVALENARSRLTAEADANRLEAEHHA 1452

  Fly   366 NSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQLTRE 430
            .:...|.|.....:|...|.|.::|:..:..:.:|||.:....:..:...:.|.:.|....|.||
 Worm  1453 QAVSSLEKKQKAFDKVIDEWKKKVDDLYLELDGAQRDARQLSGEAHKLRGQHDTLADQVEGLRRE 1517

  Fly   431 NKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFN 495
            ||.|.|:..:...:::|..|..|.|...|||||.|::||.....||||..::||.:..|...:.:
 Worm  1518 NKSLSDETRDLTESLSEGGRATHALSKNLRRLEMEKEELQRGLDEAEAALESEESKALRCQIEVS 1582

  Fly   496 QYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLD 560
            |.|.:.|:|:|||:||.|..||.....|:.:.| .:::||:.|:|:.|:||||:..|.|||::||
 Worm  1583 QIRAEIEKRIAEKEEEFENHRKVHQQTIDSIQA-TLDSETKAKSELFRVKKKLEADINELEIALD 1646

  Fly   561 VANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSHLDSA 625
            .|||.|.|.||.|::...|:.|||...::.|::.:...:....|:|:||....|.||:...|::.
 Worm  1647 HANKANEDAQKNIRRYLDQIRELQQTVDEEQKRREEFREHLLAAERKLAVAKQEQEELIVKLEAL 1711

  Fly   626 NRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQV 690
            .||:|.||...:|.....|||.:.||:|.:.||:|:.|::::.||..|...||..|::|.::...
 Worm  1712 ERARRVVESSVKEHQEHNNELNSQNVALAAAKSQLDNEIALLNSDIAEAHTELSASEDRGRRAAS 1776

  Fly   691 ELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELE 755
            :...:.|.:..|||:..:||..||.||..||:|..|.:..|...:.|..:.|.|.|.|::..:.:
 Worm  1777 DAAKLAEDLRHEQEQSQQLERFKKQLESAVKDLQERADAAEAAVMKGGAKAIQKAEQRLKAFQSD 1841

  Fly   756 LEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQ 820
            ||.|.||..|..|.|.:.:|.|:|...|..||:||...||:.::|.|||:.:.::||.|.|..:.
 Worm  1842 LETESRRAGEASKTLARADRKVREFEFQVAEDKKNYDKLQELVEKLTAKLKLQKKQLEEAEEQAN 1906

  Fly   821 QTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            ...::.|..|..||.||:|||:||..|..||::.|
 Worm  1907 SHLSKYRTVQLSLETAEERADSAEQCLVRIRSRTR 1941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 266/811 (33%)
myo-2NP_510092.2 Myosin_N 31..68 CDD:280832
Myosin_head 83..782 CDD:278492
MYSc_class_II 95..782 CDD:276951
Myosin_tail_1 876..1939 CDD:279860 266/811 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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