DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh8

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_036012291.1 Gene:Myh8 / 17885 MGIID:1339712 Length:1966 Species:Mus musculus


Alignment Length:854 Identity:295/854 - (34%)
Similarity:492/854 - (57%) Gaps:30/854 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRK 95
            ||....:..|:.:|..|::::|.||..|.:.|::::|||.::.::|||||||.|....|.|.|:|
Mouse  1105 IQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVEMNKK 1169

  Fly    96 RDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYEL 160
            |:.|..|||:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::.:.|:.:|
Mouse  1170 RETEFQKLRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDL 1234

  Fly   161 LSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKV 225
            .|..|:..|.|...||....||..:|||..|.||..|.:.::::.|:||..|..|.::.:.:...
Mouse  1235 SSNAEAIAKAKGNLEKMCRTLEDQVSELKSKEEEQQRLINELTAQRARLQTEAGEYSRQLDEKDA 1299

  Fly   226 QLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQL 290
            .:..:|.||.....|:|:.:|:||:|.:.::.|..:|.....:.|.:|.|.|||.|.:.:|:|.|
Mouse  1300 LVSQLSRSKQASTQQIEELKRQLEEETKAKNALAHALQSSRHDCDLLREQYEEEQEGKAELQRAL 1364

  Fly   291 VKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVE 355
            .|||::...|:.|:.::...|.||:||.::|...|:...|||:|::..|..:|||.|.||.:|||
Mouse  1365 SKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVE 1429

  Fly   356 VLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKV 420
            .|:||:|::|.:|..|.|.....:|...|.:.:.:||....|:.|::.:....:|.:..:..::.
Mouse  1430 DLMIDVERTNAACAALDKKQRNFDKVLSEWRQKYEETQAELESCQKESRTLSTELFKVKNAYEES 1494

  Fly   421 KDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQ 485
            .|:...|.||||.|..::.:....|.|..:.:||||...:::|.|:.|:.||.:||||..:.||.
Mouse  1495 LDHLETLRRENKNLQQEISDLTEQIAEGGKHIHELEKIKKQVEQEKCEIQAALEEAEASLEHEEG 1559

  Fly   486 RGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQI 550
            :..|:..:.||.:.:.:|::|||||||:.: |:..:.:.:.....::||.|.:.:..|:|||::.
Mouse  1560 KILRIQLELNQVKSEIDRKIAEKDEEIDQL-KRNHVRVVETMQSTLDAEIRSRNDALRVKKKMEG 1623

  Fly   551 QITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGEL 615
            .:.|:|:.|:.||:...:..:..:.....|.:.|.|.:|..|..:...:|.|:.:||...|..|:
Mouse  1624 DLNEMEIQLNHANRLAAESLRNYRNTQGILKDTQLHLDDALRGQEDLKEQLAIVERRANLLQAEI 1688

  Fly   616 EEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRI 680
            ||:|:.|:...|:::..|.:..:|:.|:..|.|.|.||::.|.|||.::|.:.|:.|||.:|.|.
Mouse  1689 EELRATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLENDVSQLQSEVEEVIQESRN 1753

  Fly   681 SDERYQK--VQVELKHV---------------------------VEQVHEEQERIVKLETIKKSL 716
            ::|:.:|  ..|...|:                           .|::.:||:....||.:||::
Mouse  1754 AEEKAKKAITDVSTTHITLPTPVLPATTRAYFCLDLFASQAAMMAEELKKEQDTSAHLERMKKNM 1818

  Fly   717 EVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVL 781
            |..||:|..||:|.|..|:.|.|:.|.|||||:|:||.|:|.|::|:||.:|.|||.||.|||:.
Mouse  1819 EQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVENEQKRNAEAVKGLRKHERRVKELT 1883

  Fly   782 VQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESS 846
            .|.|||:||::.|||.:||..||:..|:||..|.|..|.....:.|:.|.|||.||:|||.|||.
Mouse  1884 YQTEEDRKNVLRLQDLVDKLQAKVKSYKRQAEEAEEQSNANLAKFRKLQHELEEAEERADIAESQ 1948

  Fly   847 LNIIRAKHR 855
            :|.:|.|.|
Mouse  1949 VNKLRVKSR 1957

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 291/847 (34%)
Myh8XP_036012291.1 Myosin_N 37..75 CDD:397036
Motor_domain 102..769 CDD:419868
Myosin_tail_1 849..1955 CDD:396244 293/850 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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