DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh4

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_034985.2 Gene:Myh4 / 17884 MGIID:1339713 Length:1939 Species:Mus musculus


Alignment Length:819 Identity:287/819 - (35%)
Similarity:492/819 - (60%) Gaps:1/819 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAELL 101
            :..|:.:|..|::::|.||..|.:.|::::|||.::.::|||||||.|....|.|.|:||:||..
Mouse  1112 IKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQ 1176

  Fly   102 KLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIES 166
            |:|:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::.:.|:.:|.|.:|:
Mouse  1177 KMRRDLEEATLQHEATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSELKMEIDDLASNMET 1241

  Fly   167 YNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVS 231
            .:|.|...||....||..:||:..|.||..|.:.::|:.::||..|:.|.::.:.:....:..:|
Mouse  1242 VSKAKGNLEKMCRTLEDQLSEVKTKEEEQQRLINELSTQKARLHTESGEFSRQLDEKDAMVSQLS 1306

  Fly   232 FSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANAD 296
            ..|.....|:|:.:|:||:|.:.::.|..:|.....:.|.:|.|.|||.||:.:|:|.:.|||::
Mouse  1307 RGKQAFTQQIEELKRQLEEESKAKNALAHALQSARHDCDLLREQYEEEQEAKAELQRAMSKANSE 1371

  Fly   297 ATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDL 361
            ...|:.|:.::...|.||:||.::|...|:.:.|||:|::..|..:|||.|.||.:|||.|:||:
Mouse  1372 VAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNEVEDLMIDV 1436

  Fly   362 EKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQ 426
            |:||.:|..|.|.....:|...|.|.:.:||....|.||::.::...:|.:..:..::..|....
Mouse  1437 ERSNAACAALDKKQRNFDKVLAEWKQKYEETQAELEASQKESRSLSTELFKVKNAYEESLDQLET 1501

  Fly   427 LTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLA 491
            |.||||.|..::.:....|.|..:.:||||...::::.|:.||.|:.:||||..:.||.:..|:.
Mouse  1502 LKRENKNLQQEISDLTEQIAEGGKHIHELEKIKKQIDQEKSELQASLEEAEASLEHEEGKILRIQ 1566

  Fly   492 ADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELE 556
            .:.||.:.:.:|::|||||||:.:::.....:|.:.: .::||.|.:.:..|||||::..:.|:|
Mouse  1567 LELNQVKSEIDRKIAEKDEEIDQLKRNHLRVVESMQS-TLDAEIRSRNDALRIKKKMEGDLNEME 1630

  Fly   557 MSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSH 621
            :.|:.||:...:..:.::.....|.:.|.|.:|..|......:|.|:.:||...:..|:||:|:.
Mouse  1631 IQLNHANRQAAEAIRNLRNTQGMLKDTQLHLDDALRGQDDLKEQLAMVERRANLMQAEIEELRAS 1695

  Fly   622 LDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQ 686
            |:...|::|..|.:..:|:.|:..|.|.|.||::.|.|||.::|.:..:.|::.:|.|.::|:.:
Mouse  1696 LEQTERSRRVAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAK 1760

  Fly   687 KVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRD 751
            |...:...:.|::.:||:....||.:||::|..||:|..||:|.|..|:.|.|:.|.|||||:|:
Mouse  1761 KAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRE 1825

  Fly   752 LELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQE 816
            ||.|:|.|::|:.|.:|.|||.||.|||:..|.|||:||::.|||.:||...|:..|:||..|.|
Mouse  1826 LENEVENEQKRNIEAVKGLRKHERRVKELTYQTEEDRKNVLRLQDLVDKLQTKVKAYKRQAEEAE 1890

  Fly   817 GVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            ..|.....:.|:.|.|||.||:|||.|||.:|.:|.|.|
Mouse  1891 EQSNVNLAKFRKIQHELEEAEERADIAESQVNKLRVKSR 1929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 285/815 (35%)
Myh4NP_034985.2 Myosin_N 35..73 CDD:308391
MYSc_Myh4 100..770 CDD:276879
Actin-binding. /evidence=ECO:0000250 659..681
Actin-binding. /evidence=ECO:0000250 761..775
SMC_N 850..1927 CDD:330553 285/815 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1128..1147 7/18 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1153..1172 10/18 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1276..1299 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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