DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh11

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_006521906.1 Gene:Myh11 / 17880 MGIID:102643 Length:1979 Species:Mus musculus


Alignment Length:883 Identity:236/883 - (26%)
Similarity:424/883 - (48%) Gaps:84/883 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 LSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDA 98
            |..:..||..|..||:||:.||..|.:.|::|.||..::..:...||:.......|.|...||:.
Mouse  1117 LKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQ 1181

  Fly    99 ELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQ 163
            |:..|:|.|::.....|.....:::||.:.:.:..||:|...:.||..:|.|...:.|..:|..:
Mouse  1182 EVTVLKKALDEETRSHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKSKQTLEKENADLAGE 1246

  Fly   164 IESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQE--------------NI 214
            :....:.|...|....||||.:.:|..|..:..|...::|....:|..|              .|
Mouse  1247 LRVLGQAKQEVEHKKKKLEVQLQDLQSKCSDGERARAELSDKVHKLQNEVESVTGMLNEAEGKAI 1311

  Fly   215 ELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEE 279
            :|.|||..|.              |||:|.:..|::|.|::..:.:.|.|:|.|.:|:::||:||
Mouse  1312 KLAKDVASLG--------------SQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQDQLDEE 1362

  Fly   280 SEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLE 344
            .||:.:|||.:...|...:..:.|. .:.|:..|.:||.:::.|..:..|.:..|......:.||
Mouse  1363 MEAKQNLERHVSTLNIQLSDSKKKL-QDFASTIEVMEEGKKRLQKEMEGLSQQYEEKAAAYDKLE 1426

  Fly   345 KMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHAD 409
            |.|.||..|::.|::||:..    |:|   |:.|||...:....|.|        ::::.:|:||
Mouse  1427 KTKNRLQQELDDLVVDLDNQ----RQL---VSNLEKKQKKFDQLLAE--------EKNISSKYAD 1476

  Fly   410 ------------------LVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELE 456
                              |.|.:.|..:.|:   :|.|.||.|..::.:...:.:::.:.:||||
Mouse  1477 ERDRAEAEAREKETKALSLARALEEALEAKE---ELERTNKMLKAEMEDLVSSKDDVGKNVHELE 1538

  Fly   457 LELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSI 521
            ...|.||.:.:|:....:|.|...:|.|....||..:....:...||.|..:||:.|..|:|...
Mouse  1539 KSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVNMQALKGQFERDLQARDEQNEEKRRQLQR 1603

  Fly   522 EIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAH 586
            ::.:.... :|.|.:.:......||||:..:.:||:..|.|.|..   ::.||    ||.:|||.
Mouse  1604 QLHEYETE-LEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGR---EEAIK----QLRKLQAQ 1660

  Fly   587 YEDVQRQL---QATLDQ-YAVA---QRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRIN 644
            .:|.||:|   :|:.|: :|.:   :::...|..:|.:::..|.:|.||::..:|:.||.|..:.
Mouse  1661 MKDFQRELDDARASRDEIFATSKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELA 1725

  Fly   645 ELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKL 709
            ...:...:|...|.:||..::.:..:.||....:....:|.:|..::.:.:..::..|:....|.
Mouse  1726 SSLSGRNTLQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATLQAEQLSNELATERSTAQKN 1790

  Fly   710 ETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKE 774
            |:.::.||.:.|.|..:|:|||....|..|..::.|||:|..||.::|:|.|......|.|::|:
Mouse  1791 ESARQQLERQNKELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQVEQEAREKQAATKSLKQKD 1855

  Fly   775 RTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDR 839
            :.:||||:|.|:::|.....::..:|...|:...:|||.|.|..||:.....|:.||||:.|.:.
Mouse  1856 KKLKEVLLQVEDERKMAEQYKEQAEKGNTKVKQLKRQLEEAEEESQRINANRRKLQRELDEATES 1920

  Fly   840 ADTAESSLNIIRAKHRTFVTTSTVP----GSQVYIQET 873
            .:.....:|.:::|.|.....|.||    |.:..|:.|
Mouse  1921 NEAMGREVNALKSKLRRGNEASFVPSRRAGGRRVIENT 1958

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 228/857 (27%)
Myh11XP_006521906.1 Myosin_N 33..71 CDD:367160
MYSc_class_II 99..778 CDD:276951
Myosin_tail_1 855..1935 CDD:366712 228/858 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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