DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and Myh1

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:NP_109604.1 Gene:Myh1 / 17879 MGIID:1339711 Length:1942 Species:Mus musculus


Alignment Length:819 Identity:292/819 - (35%)
Similarity:492/819 - (60%) Gaps:1/819 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAELL 101
            :..|:.:|..|::::|.||..|.:.|::::|||.::.::|||||||.|....|.|.|:||:||..
Mouse  1115 IKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQ 1179

  Fly   102 KLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIES 166
            |:|:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::.:.|:.:|.|.:|.
Mouse  1180 KMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMEV 1244

  Fly   167 YNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVS 231
            .:|.|...||....||..:|||..|.||..|.:.::::.|.||..|:.|.::.:.:....:..:|
Mouse  1245 ISKSKGNLEKMCRTLEDQVSELKTKEEEQQRLINELTAQRGRLQTESGEYSRQLDEKDSLVSQLS 1309

  Fly   232 FSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANAD 296
            ..|.....|:|:.:|:||:|.:.:|.|..:|.....:.|.:|.|.|||.||:.:|:|.:.|||::
Mouse  1310 RGKQAFTQQIEELKRQLEEEIKAKSALAHALQSSRHDCDLLREQYEEEQEAKAELQRAMSKANSE 1374

  Fly   297 ATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDL 361
            ...|:.|:.::...|.||:||.::|...|:.:.|||:|::..|..:|||.|.||.:|||.|:||:
Mouse  1375 VAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDV 1439

  Fly   362 EKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQ 426
            |::|.:|..|.|.....:|...|.|.:.:||....|.||::.::...:|.:..:..::..|:...
Mouse  1440 ERTNAACAALDKKQRNFDKILAEWKQKYEETHAELEASQKESRSLSTELFKIKNAYEESLDHLET 1504

  Fly   427 LTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLA 491
            |.||||.|..::.:....|.|..:|:||||...:::|.|:.||.||.:||||..:.||.:..|:.
Mouse  1505 LKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQIEQEKSELQAALEEAEASLEHEEGKILRIQ 1569

  Fly   492 ADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELE 556
            .:.||.:.:.:|::|||||||:.: |:..|.:.:.....::||.|.:.:..|:|||::..:.|:|
Mouse  1570 LELNQVKSEIDRKIAEKDEEIDQL-KRNHIRVVESMQSTLDAEIRSRNDAIRLKKKMEGDLNEME 1633

  Fly   557 MSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSH 621
            :.|:.:|:...:..:..:.....|.:.|.|.:|..|..:...:|.|:.:||...|..|:||:|:.
Mouse  1634 IQLNHSNRMAAEALRNYRNTQGILKDTQLHLDDALRGQEDLKEQLAMVERRANLLQAEIEELRAT 1698

  Fly   622 LDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQ 686
            |:...|:::..|.:..:|:.|:..|.|.|.||::.|.|||.::|.:..:.|::.:|.|.::|:.:
Mouse  1699 LEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAK 1763

  Fly   687 KVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRD 751
            |...:...:.|::.:||:....||.:||:||..||:|..||:|.|..|:.|.|:.|.|||||:|:
Mouse  1764 KAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRE 1828

  Fly   752 LELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQE 816
            ||.|:|.|::|:.|.||.|||.||.|||:..|.|||:||::.|||.:||..:|:..|:||..|.|
Mouse  1829 LEGEVENEQKRNVEAIKGLRKHERRVKELTYQTEEDRKNVLRLQDLVDKLQSKVKAYKRQAEEAE 1893

  Fly   817 GVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            ..|.....:.|:.|.|||.||:|||.|||.:|.:|.|.|
Mouse  1894 EQSNVNLAKFRKIQHELEEAEERADIAESQVNKLRVKSR 1932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 290/815 (36%)
Myh1NP_109604.1 Myosin_N 35..73 CDD:367160
MYSc_Myh1_mammals 100..773 CDD:276875
Actin-binding. /evidence=ECO:0000250 662..684
Actin-binding. /evidence=ECO:0000250 764..778
Myosin_tail_1 853..1930 CDD:366712 290/815 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1175 10/18 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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