DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and LOC100495968

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_002935256.2 Gene:LOC100495968 / 100495968 XenbaseID:XB-GENE-29082907 Length:1941 Species:Xenopus tropicalis


Alignment Length:840 Identity:283/840 - (33%)
Similarity:492/840 - (58%) Gaps:23/840 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSL-SRLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE 87
            |:|..:| |:|:.||:.||       :::|.||.:|.:.|:::|.::.::.::|||||||.|...
 Frog  1100 IEDEQALSSQLQKKIKELQARTEELEEEIEAERTVRAKAEKQRALITRELEEISERLEEAGGATA 1164

  Fly    88 HQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAK 152
            .|.|.|:||:.|..|:|:.||:.:|..|.....|:|||.:.:.:..||::.|.:.|.:.||:|::
 Frog  1165 VQIEMNKKRENEFQKMRRDLEEANLRHETIACNLRKKHADTVAELGEQLDNLQRIKQKLEKEKSE 1229

  Fly   153 FQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELT 217
            .:.|:.:..|.:::.:|.|...||....||..:||...|.||..|.:.|:::|::||..||.||:
 Frog  1230 LKMEIDDFASNLDNTSKLKANFEKLNHVLEDQLSEAKAKGEEQQRLLNDLTTHKARLLSENGELS 1294

  Fly   218 KDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEA 282
            :..::.:..:..:|..|...|.|:|:.:|:||:|.:.::.|..::.....:.|.:|.|.|||.||
 Frog  1295 RQGEEKESLISQLSRGKQAFIQQIEELKRQLEEETKAKNALAHAVQSARHDCDLLREQFEEEQEA 1359

  Fly   283 RIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMK 347
            :.:|:|.|.|||.:.:.|:||:.::...|.||:||.::|....:.|.|:.:.::..|..:|||.|
 Frog  1360 KSELQRSLSKANNEVSQWRNKYETDAIQRTEELEEAKKKLAQHLQEAEDQVAAVNSKCASLEKTK 1424

  Fly   348 TRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVR 412
            .||.|||:.|:||:|:|||:...|.|.....:|..||.|.:..|.....|.:.::.::...::.:
 Frog  1425 QRLQSEVDDLMIDVERSNNAAAALDKKQRNFDKVLVEWKQKYGEGQAELEAALKECRSLSTEIFK 1489

  Fly   413 TVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAE 477
            ..:..::..:....|.||||.|..::.:....|.|..:.::||:...:::|.:::|:.||.:|||
 Frog  1490 MRNAYEEALELTETLKRENKNLQQEITDLTEHIGESGKSINELDKARKQVEQQKNEMQAALEEAE 1554

  Fly   478 AGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVT 542
            ...:.||.:..|:..:.||.:.:.::::||||||||.:::......:.|.. .:::|.|.:.|..
 Frog  1555 GSLEHEETKFLRIQLELNQVKSEMDKKIAEKDEEIEQLKRNNQRATDTLQT-TLDSEIRSRNEAL 1618

  Fly   543 RIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQL------QATL-DQ 600
            |:|||::..:.|||:.|:.||:...:.||       ||..:|...:|...||      ::.| :|
 Frog  1619 RLKKKMEGDLNELEIQLNQANRQAAEAQK-------QLRNVQTQNKDTLLQLDNKERIESDLKEQ 1676

  Fly   601 YAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELS 665
            .||.:||.|....|:||:|:.|:..:|:.:..|.:..:::.|:..|.:.|.||.:.|.|||.::|
 Frog  1677 IAVLERRTALQLAEIEEIRAALEMLDRSCKVAEQELADSSERLQLLRSHNTSLTNSKKKLESDVS 1741

  Fly   666 VVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEV 730
            .:.|:.||..:|.|.::|:.:|...:...:.|::.:||:....|..:||:||..||:|..||:|.
 Frog  1742 QLQSEVEESIQEARNTEEKAKKAITDAALMAEELKKEQDTSAHLVRMKKNLEQTVKDLQHRLDEA 1806

  Fly   731 ELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQ 795
            |..|:.|.|:.:.|||.|:|:||.|||.|::|..|.:|.:||.||.:||:..|.|||:||::.||
 Frog  1807 EQLALKGGKKQLQKLETRVRELENELENEQKRGVEAVKGVRKYERRMKELTYQNEEDRKNVLRLQ 1871

  Fly   796 DALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            |.:||...|:..|:||..|.|..:.....|.|:.|.||..||:|||.|:|.:|.:|||.|
 Frog  1872 DLVDKLQLKVKAYKRQAEEAEEQANAHMARYRKMQHELGEAEERADIADSQVNKLRAKSR 1931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 278/833 (33%)
LOC100495968XP_002935256.2 Myosin_N 33..77 CDD:460670
MYSc_class_II 100..772 CDD:276951
Myosin_tail_1 852..1929 CDD:460256 280/836 (33%)
Blue background indicates that the domain is not in the aligned region.

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