DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myh4l

DIOPT Version :10

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_031747897.1 Gene:myh4l / 100495638 XenbaseID:XB-GENE-29082771 Length:1938 Species:Xenopus tropicalis


Alignment Length:840 Identity:297/840 - (35%)
Similarity:500/840 - (59%) Gaps:23/840 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSL-SRLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE 87
            |:|..|| |:|:.||:.||       :::|.||..|.:||:::||||.::.::|||||||.|...
 Frog  1097 IEDEQSLGSQLQKKIKELQARIEELEEEIEAERAARAKIEKQRADLSRELEEISERLEEAGGATS 1161

  Fly    88 HQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAK 152
            .|.|.|:||:||..|:|:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::
 Frog  1162 AQIEMNKKREAEFQKVRRDLEEATLQHEATAGALRKKHADSVAELGEQIDNLQRVKQKLEKEKSE 1226

  Fly   153 FQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELT 217
            .:.|:.:|.|.:|:.:|.|...||....:|..:||:..|.:|..|.:.|:|:.|:|...||.||:
 Frog  1227 LKMEIDDLASNLENVSKSKANLEKVNRVIEDQLSEVKSKSDEQQRLLNDLSAQRARFQTENGELS 1291

  Fly   218 KDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEA 282
            :.|::.:..:..:|..|.....|:|:.:|:||:|.:.::.|..:|.....:.|.:|.|.|||.||
 Frog  1292 RQVEEKESLISQLSRGKQGFTQQIEELKRQLEEESKAKNALAHALQSARHDSDLLREQYEEEQEA 1356

  Fly   283 RIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMK 347
            :.:|:|.|.|||.:.:.|:.|:.::...|.||:||.::|...|:.:.||.:|::..|..:|||.|
 Frog  1357 KAELQRSLSKANGEVSQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEQVEAVNSKCASLEKTK 1421

  Fly   348 TRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVR 412
            .||.||||.|::|:|::|::...|.|.....:|...|.|.:.:|.....|.:.::.:::..::.:
 Frog  1422 QRLQSEVEDLMVDVERANSAAAALDKKQRNFDKVLSEWKQKYEEGQAELEAALKEARSQSTEIFK 1486

  Fly   413 TVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAE 477
            ..:..::..::...|.||||.|..::.:....|.|..:.::|||...:::|.|:.:|.||.:|||
 Frog  1487 MKNAYEESLEHVETLKRENKNLQQEISDLTEQIGESGKSINELEKAKKQVEQEKSDLQAALEEAE 1551

  Fly   478 AGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVT 542
            ...:.||.:..|:..:.||.:.:.:|::||||||||.:::.:...|:.|.: .:::|.|.:.:..
 Frog  1552 GSLEHEEAKILRIQLELNQIKSEVDRKIAEKDEEIEQLKRNSQRAIDTLQS-TLDSEIRSRNDAL 1615

  Fly   543 RIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATL-------DQ 600
            |:|||::..:.|||:.|..||:...:.||       ||..:||.|:|.|.||...|       :|
 Frog  1616 RLKKKMEGDLNELEIQLSHANRQAAEAQK-------QLRNVQAQYKDAQLQLDDALRGQDDLKEQ 1673

  Fly   601 YAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELS 665
            .||.:||......|:||.|:.|:...|:::..|.:..:|:.|:..|.:.|.||:..|.|||.::|
 Frog  1674 VAVIERRNNLQQAEIEENRAALEQTERSRKIAEQELLDASERVQLLHSQNTSLIGSKKKLEADIS 1738

  Fly   666 VVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEV 730
            .:.|:.||..:|.|.::|:.:|...:...:.|::.:||:....||.:||:||..||:|..||:|.
 Frog  1739 QLQSEAEEAVQEARNAEEKAKKAITDAALMAEELKKEQDTSAHLERMKKNLEQTVKDLQNRLDEA 1803

  Fly   731 ELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQ 795
            |..|:.|.|:.:.|||.|:|:||.||:.|::|..:.:|.:||.||.|||:..|.|||:||::.||
 Frog  1804 EQLAMKGGKKQLQKLETRVRELENELDNEQKRGVDAVKGVRKYERRVKELTYQTEEDRKNVLRLQ 1868

  Fly   796 DALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            |.:||...|:..|:||..|.|..:.....|.|:.|.|||.||:|||.|||.:|.:|||.|
 Frog  1869 DLVDKLQLKVKAYKRQAEEAEEQATSHLGRFRKVQHELEEAEERADIAESQVNKLRAKSR 1928

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:460256 292/833 (35%)
myh4lXP_031747897.1 Myosin_N 32..76 CDD:460670
Motor_domain 100..769 CDD:473979
Myosin_tail_1 849..1926 CDD:460256 294/836 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.