DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myh9

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_017949131.2 Gene:myh9 / 100487997 XenbaseID:XB-GENE-1002222 Length:1960 Species:Xenopus tropicalis


Alignment Length:870 Identity:232/870 - (26%)
Similarity:429/870 - (49%) Gaps:67/870 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TADVNIEYIQDLSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE 87
            :|..||.    |..:..||.:|..||:|||.||..|.:.|::|.||..::..:...||:......
 Frog  1096 SAQKNIA----LKKIRELESQISELQEDLETERAARNKAEKQKRDLGEELEALKTELEDTLDSTA 1156

  Fly    88 HQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAK 152
            .|.|...||:.|:.:|:|.|||.....|.....:::||::.:.:..||:|...:.|...||.|..
 Frog  1157 AQQELRTKREQEVTQLKKTLEDEARTHEVQIQEIRQKHSQAVEELSEQLEQTKRLKGNLEKAKQS 1221

  Fly   153 FQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKI-----------EELNRTVIDISSHR 206
            .:.|..||.:::::..:.|..||....|:|..:.||.||:           |:.||..:::.:..
 Frog  1222 LEGERNELANEVKALLQGKGDSEHKRKKVEGQLQELQVKVTEGDRVRAELSEKANRLQVELDNVN 1286

  Fly   207 SRLSQ---ENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIE 268
            |.|||   ::|:|.||...|:              |||:|.:..|::|.|::....:.|.|:|.|
 Frog  1287 SLLSQADGKSIKLGKDFSTLE--------------SQLQDTQELLQEETRQKLSFSTKLKQMEDE 1337

  Fly   269 LDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHI 333
            .:.:..|:|||.||:.:|.:|:....:.....:.|.:..|.: .|.|||:::|.|..:..:.:..
 Frog  1338 KNGLLEQIEEEEEAKKNLSKQISTLQSQMADMKKKMDENVGS-LETVEELKKKLQKDLESVNQRF 1401

  Fly   334 ESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDE--TIILY 396
            |......:.|||.||||..|::.:.:||:..    |::   |:.|||...:....|.|  ||...
 Frog  1402 EEKAAAYDKLEKTKTRLQQELDDIAVDLDHQ----RQI---VSNLEKKQKKFDQLLGEEKTISAK 1459

  Fly   397 ETSQRD-----LKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELE 456
            ...:||     .:.|....:.....|::..:...:|.|.||:|..::.:...:.:::.:.:||||
 Frog  1460 YADERDRAEAEAREKETKALALARSLEEALEAKAELERLNKQLRTEMEDLVSSKDDVGKSVHELE 1524

  Fly   457 LELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSI 521
            ...|.||.:.:|:....:|.|...:|.|....||..:....:...||.|..:||:.|..:||...
 Frog  1525 KSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEDKKKQLVR 1589

  Fly   522 EIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAH 586
            :::::.|. :|.|.:.::.....:|||::.:.:||..:|.|||..   ::.||    ||.:|||.
 Frog  1590 QVKEMEAE-LEDERKQRSVAVAARKKLEMDLKDLEGQIDSANKNR---EEAIK----QLRKLQAQ 1646

  Fly   587 YEDVQRQLQAT-------LDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRIN 644
            .:|.||:|..|       |.|...::::|..:..|:..::..|.:|.|.||..:.:.:|.|..|.
 Frog  1647 IKDYQRELDDTRASRDDILSQSKESEKKLKSMEAEMIHMQEELAAAERGKRQAQQERDELADEIA 1711

  Fly   645 ELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKL 709
            ..:......:..|.:||..::.:..:.||......:.::|.:|..:::..:...::.|:....|.
 Frog  1712 NNSGKGALALEEKRRLESRIAQLEEELEEEQGNTELVNDRLKKATLQVDQLNADLNAERSNAQKN 1776

  Fly   710 ETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKE 774
            |..::.::.:.|.|..:|:|:|....:..|..|:.|||:|..||.:|:.|.:......|.:|:.|
 Frog  1777 ENARQQMDRQNKELKTKLQELEGTVKSKFKANITALEAKIAQLEEQLDTETKERQNASKQVRRTE 1841

  Fly   775 RTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDR 839
            :.:|:|::|.:::::|....:|..:|:..::...:||:.|.|..:|:.....|:.|||||.|.:.
 Frog  1842 KKLKDVMMQVDDERRNAEQYKDQAEKNNVRMKQLKRQVEEAEEEAQRANAMRRKLQRELEDATET 1906

  Fly   840 ADTAESSLNIIRAKHR-----TFVT 859
            |:.....:|.:::|.|     .|||
 Frog  1907 AEAMNREVNTLKSKLRRGGDVPFVT 1931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 224/846 (26%)
myh9XP_017949131.2 Myosin_N 29..68 CDD:397036
Motor_domain 95..764 CDD:419868
Myosin_tail_1 842..1921 CDD:396244 227/858 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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