DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prm and LOC100333572

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_021336135.1 Gene:LOC100333572 / 100333572 -ID:- Length:876 Species:Danio rerio


Alignment Length:826 Identity:271/826 - (32%)
Similarity:468/826 - (56%) Gaps:92/826 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE--------HQFEANRKR 96
            |:.:|..|:::||.||.||.::|:::||||.::..:::||||| |||.        ...|.||||
Zfish    75 LQVRIEELEEELEAERGLRAKVEKQRADLSRELEDLTDRLEEA-GGATALTGSSLGDNMEMNRKR 138

  Fly    97 DAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELL 161
            |.||.:||:.|::..|:::..:..::|:|::.:::..||.|.|.:.:|:.||:|           
Zfish   139 DLELQRLRRELDESALQADAVSAAMRKRHSDALSELSEQCESLQRTRAKLEKEK----------- 192

  Fly   162 SQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQ 226
                                    ..|:::::||..|                            
Zfish   193 ------------------------QSLSLELDELTHT---------------------------- 205

  Fly   227 LDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLV 291
            |||:..:|               ||.:.::||.||:..::.||:.::.|||||.|::.:|:|.:.
Zfish   206 LDTLQKNK---------------DELKAKALLSSSVCSLQQELEVLKEQLEEEQESKQELQRLVS 255

  Fly   292 KANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEV 356
            |.|:|.|.|:::..::.....:|:||.::|...|:.|.||..|:...|..:|||.|.||..|||.
Zfish   256 KLNSDVTHWRSRSEADTIQHCDELEETKKKLCARLQEAEEAAEATQAKCCSLEKSKQRLQGEVEE 320

  Fly   357 LIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADL--VRTVHELDK 419
            |..||||:.:.|..|.|....||:...:.|.:.::.::..|..:.:.:...|:|  :|:|:|  :
Zfish   321 LCADLEKAVSVCAVLEKKQKMLERQQSDWKQKSEDLLLELENCRTESRKHSAELFKIRSVYE--E 383

  Fly   420 VKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEE 484
            ..:....:.|||..|.:::.:....:::..:.:|||:...:::|.:::||.|:.:|:||..:|||
Zfish   384 SSEEREAMRRENNTLQEEIADLTDQLSDGGKSVHELQKMKKKIEMKKEELQASLEESEAALEAEE 448

  Fly   485 QRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQ 549
            .:..||..:.:|.:.|.||||.||:||.||.||.....:|.|.|.| :.|::.|||.||.||||:
Zfish   449 TKVLRLQLEVSQVKADLERRLQEKEEEFEAARKSHQRALESLQAGV-DVESKAKTEATRQKKKLE 512

  Fly   550 IQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGE 614
            ..:.|||:.::...|:|.:|.|..||...|:.||:|..|:..|..:...|::.:.:||.|.|..|
Zfish   513 SDLAELELQVEQQKKSNSELIKSSKKMQQQIKELEAQLEEELRAQETLRDEHTLLERRCALLTAE 577

  Fly   615 LEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELR 679
            .||..:.|::.:|..||:|.:.:|...:...|.....:::.:|.|||.::..:..::||:..|||
Zfish   578 GEEKHNTLENTHRVCRTLETELQEQKEKHTLLEEQLQAVLCVKRKLEVDVQQLQQEHEELQNELR 642

  Fly   680 ISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISK 744
            .::::.:|...|...|:||:..:||.:..|:.:|||||::::::|.||||.|.::|.|.|:|:.|
Zfish   643 AANDKAKKSACEAARVLEQLCVQQEHVSDLQRVKKSLELQIRDMSGRLEEAEQSSVRGGKKIMQK 707

  Fly   745 LEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYR 809
            ||||:::|||||:.|:::|:||:|.|||.||.:||:|.|.||:|||...:|:.|::...|:..|:
Zfish   708 LEARVKELELELDAEQKKHSETMKTLRKNERRLKELLFQSEEEQKNQQRMQEQLERLQNKMKNYK 772

  Fly   810 RQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            ||:.|.|..:.....:.|:...||:.||:|||.|||:|..||.|:|
Zfish   773 RQVEEAEEQANMNLAKYRKTVHELDDAEERADIAESALTKIRTKNR 818

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 269/822 (33%)
LOC100333572XP_021336135.1 SMC_N <28..816 CDD:330553 269/822 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 309 1.000 Inparanoid score I2600
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.960

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