DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prm and myha

DIOPT Version :9

Sequence 1:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster
Sequence 2:XP_021332193.1 Gene:myha / 100149148 ZFINID:ZDB-GENE-060531-50 Length:1933 Species:Danio rerio


Alignment Length:833 Identity:291/833 - (34%)
Similarity:495/833 - (59%) Gaps:9/833 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IQDLSSL-SRLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAE 87
            |:|..|| ::|:.||:.||       :::|.||..|.::|:::||||.::.::|||||||.|...
Zfish  1094 IEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATA 1158

  Fly    88 HQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAK 152
            .|.|.|:||:||..|||:.||:..|:.|.|...|:||..:.:.:..||::.|.:.|.:.||:|::
Zfish  1159 AQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRKKQADSVAELGEQIDNLQRVKQKLEKEKSE 1223

  Fly   153 FQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELT 217
            ::.|:.:|.|.:|:..|.|...||....||..:||:..|.:|..|.:.|:|:.|:||..||.|..
Zfish  1224 YKMEIDDLSSNMEAVAKAKANLEKMCRTLEDQLSEIKSKSDENLRQINDLSAQRARLQTENGEFG 1288

  Fly   218 KDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEA 282
            :.:::.:..:..::..|.....|:|:.:|::|:|.:.::.|..::.....:.|.:|.|.|||.||
Zfish  1289 RQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEA 1353

  Fly   283 RIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMK 347
            :.:|:|.:.|||::...|:.|:.::...|.||:||.::|...|:.|.||.||::..|..:|||.|
Zfish  1354 KAELQRGMSKANSEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTK 1418

  Fly   348 TRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVR 412
            .||..|||.|:||:|::|:....|.|.....:|...|.|.:.:|.....|.:|::.::...:|.:
Zfish  1419 QRLQGEVEDLMIDVERANSLAANLDKKQRNFDKVLAEWKQKYEEGQAELEGAQKEARSLSTELFK 1483

  Fly   413 TVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAE 477
            ..:..::..|....|.||||.|..::.:....|.|..:.:||||...:.:|.|:.|:..|.:|||
Zfish  1484 MKNSYEETLDQLETLKRENKNLQQEISDLTEQIGETGKSIHELEKAKKTVETEKAEIQTALEEAE 1548

  Fly   478 AGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVT 542
            ...:.||.:..|:..:.||.:.:.:|:|||||||||.| |:.|..:.:.....:::|.|.:.:..
Zfish  1549 GTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEIEQI-KRNSQRVTEAMQSTLDSEVRSRNDAL 1612

  Fly   543 RIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRR 607
            |||||::..:.|:|:.|..||:...:.||.::....||.:.|.|.:|..|..:...:|.|:.:||
Zfish  1613 RIKKKMEGDLNEMEIQLSHANRQAAEAQKQLRNVQSQLKDAQLHLDDAVRAQEDMKEQVAMVERR 1677

  Fly   608 LAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYE 672
            ...:..|:||:|:.|:...|.::..|.:..:|:.|:..|.:.|.||::.|.|||.:|..:.|:.|
Zfish  1678 NTLMQSEIEELRAALEQTERGRKVAEQELVDASERVGLLHSQNTSLLNTKKKLESDLVQIQSEVE 1742

  Fly   673 EVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAG 737
            :..:|.|.::|:.:|...:...:.|::.:||:....||.:||:||:.||:|..||:|.|..|:.|
Zfish  1743 DTVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEITVKDLQHRLDEAENLAMKG 1807

  Fly   738 SKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKST 802
            .|:.:.|||:|:|:||.|::.|:||.|:.:|.:||.||.|||:..|.|||:||:..|||.:||..
Zfish  1808 GKKQLQKLESRVRELESEIDAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNINRLQDLVDKLQ 1872

  Fly   803 AKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855
            .|:..|:||..|.|..:....:::|:.|.|||.||:|||.:||.:|.:|||.|
Zfish  1873 LKVKAYKRQSEEAEEQANSHLSKLRKVQHELEEAEERADISESQVNKLRAKSR 1925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 286/826 (35%)
myhaXP_021332193.1 Myosin_N 35..74 CDD:308391
MYSc_class_II 101..766 CDD:276951
SMC_N 846..1923 CDD:330553 288/829 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.