DRSC/TRiP Functional Genomics Resources

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Protein Alignment h and bhlhe40

DIOPT Version :9

Sequence 1:NP_001014577.1 Gene:h / 38995 FlyBaseID:FBgn0001168 Length:337 Species:Drosophila melanogaster
Sequence 2:XP_004914192.2 Gene:bhlhe40 / 779502 XenbaseID:XB-GENE-486416 Length:385 Species:Xenopus tropicalis


Alignment Length:315 Identity:72/315 - (22%)
Similarity:121/315 - (38%) Gaps:102/315 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQEL------QRQQAAMQ 96
            ::||:||.|||.|:.:||.|:.:..|.....|  ||||.:||.|:||::.|      |:||....
 Frog    81 LIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHVRSLSSLIEQQQQQILTL 143

  Fly    97 QAADPKIVNK------FKAGFADCVNEVSRFPGIEPAQRRRLLQHL------------------- 136
            |:..|...|:      |.:||..|..|..||  ::..:|:.|:.||                   
 Frog   144 QSGSPSEENRISAEEMFHSGFQLCAEEALRF--LQGGERKELVAHLHRVASKLGPASFPKVTEKP 206

  Fly   137 ------SNCI--------------NGVKT-------------ELHQQQRQQQQQSIHAQMLPS-- 166
                  :||:              :|..|             |.|.:..::::.....:::..  
 Frog   207 VPKVQATNCVPVICRAAPLPSGEQSGTDTDTDSGYGGEADKGECHHEGTEKEEAPTLERIIKQEK 271

  Fly   167 ---PPSSPEQDSQQGAAAPYLFGIQQTASGYF-------LPNGMQVIP----TKLP-------NG 210
               |...|..::.:....   |....::.|.:       ||  ..:||    |.||       .|
 Frog   272 DEIPKKKPRMEATEEETR---FCSDLSSLGVYPAQPPLCLP--FYLIPPSASTYLPMLEKYWYPG 331

  Fly   211 SIALVLP----QSLPQQQQQQLLQHQQQQQQLAVAAAAAAAAAAQQQPMLVSMPQ 261
            |:.::.|    .||..|...: .|| ...|.::...::|...|.:|.|.|.:.|:
 Frog   332 SVPMIYPPISHSSLLNQDTSK-PQH-TSPQTVSPLDSSALLQALKQMPTLGTEPK 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hNP_001014577.1 HLH 29..88 CDD:238036 22/49 (45%)
ORANGE 106..141 CDD:128787 13/79 (16%)
bhlhe40XP_004914192.2 bHLH_SF 61..151 CDD:412148 28/71 (39%)
Hairy_orange 160..192 CDD:400076 11/33 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10985
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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