DRSC/TRiP Functional Genomics Resources

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Protein Alignment hry and her8.2

DIOPT Version :10

Sequence 1:NP_523977.2 Gene:hry / 38995 FlyBaseID:FBgn0001168 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001159638.1 Gene:her8.2 / 565269 ZFINID:ZDB-GENE-060815-4 Length:211 Species:Danio rerio


Alignment Length:235 Identity:66/235 - (28%)
Similarity:96/235 - (40%) Gaps:73/235 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQQA 93
            |.:|:..||::|::||.|||.||::|:..::...|.|   .||||||||||.||||||.:|    
Zfish    20 KEERKLRKPLIERKRRERINLCLDQLRETVVAVFKPD---QSKLEKADILEMTVKHLQNIQ---- 77

  Fly    94 AMQQAADPKIVN-----KFKAGFADCVNEVSRF----PGIEPAQRRRLLQHL--------SNCIN 141
             ..:.:|| ::|     ::..|:..|:.||...    ..::.....|||.||        .:|..
Zfish    78 -SSRVSDP-VLNTGARQRYSTGYIQCMQEVHNLLHSCDWMDKTLGSRLLNHLFKSLPLSAKDCPR 140

  Fly   142 GVKTELHQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYFLPNGMQVIP-- 204
            ..||.|                    .|.|...|:..:     |.:.:|||    |......|  
Zfish   141 LPKTSL--------------------TSVPSDHSEYSS-----FHVDETAS----PKPCSSSPFL 176

  Fly   205 TKLPNGSIALVLPQSLPQQQQQQL----LQHQQQQQQLAV 240
            .|.||            |.|.|..    :.|..:...|:|
Zfish   177 CKRPN------------QSQNQHFTPIRMPHDVESSHLSV 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hryNP_523977.2 bHLH-O_hairy_like 30..88 CDD:381483 30/57 (53%)
ORANGE 106..141 CDD:128787 10/46 (22%)
her8.2NP_001159638.1 bHLH_O_HES 30..80 CDD:381416 28/57 (49%)
Hairy_orange 93..132 CDD:462193 9/38 (24%)

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