DRSC/TRiP Functional Genomics Resources

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Protein Alignment hry and her8a

DIOPT Version :10

Sequence 1:NP_523977.2 Gene:hry / 38995 FlyBaseID:FBgn0001168 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_955918.4 Gene:her8a / 323656 ZFINID:ZDB-GENE-030131-2376 Length:221 Species:Danio rerio


Alignment Length:342 Identity:86/342 - (25%)
Similarity:127/342 - (37%) Gaps:130/342 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VTAANMTNVLGTAVVPAQLKETPLKSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARH 69
            :||:||.|        ...|....|.:|:..||::||:||.|||:.|.:||.:::||...|   .
Zfish     1 MTASNMGN--------GPEKNFNAKEERKLRKPLIEKKRRERINSSLEQLKGIMVDAYNLD---Q 54

  Fly    70 SKLEKADILEKTVKHLQELQR---QQAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPA 127
            |||||||:||.||:|::.|||   |..:.......:...::.:|:..|::||...    ||::..
Zfish    55 SKLEKADVLEITVQHMENLQRGHGQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLLLSCPGMDKT 119

  Fly   128 QRRRLLQHLSNCINGVKTELHQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTAS 192
            ...|||.||...:..:.||                        |...|..|.::|  ..:..|.|
Zfish   120 LGARLLNHLLKSLPHISTE------------------------PSGTSSAGTSSP--LPLSPTQS 158

  Fly   193 GYFLPNGMQVIPTKLPNGSIALVLPQSLPQQQQQQLLQHQQQQQQLAVAAAAAAAAAAQQQPMLV 257
            ...||:.:|      |:   ||.|..|.|......|::.::|                       
Zfish   159 PINLPSSLQ------PH---ALHLSPSPPSSPTHSLVRPREQ----------------------- 191

  Fly   258 SMPQRTASTGSASSHSSAGYESAPGSSSSCSYAPPSPANSSYEPM--DIKPSVIQRVPMEQQPLS 320
                                 |:|.||.|    |.|||  |..|.  .:.||:            
Zfish   192 ---------------------SSPPSSPS----PQSPA--SLPPFFPGVDPSM------------ 217

  Fly   321 LVIKKQIKEEEQPWRPW 337
                         ||||
Zfish   218 -------------WRPW 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hryNP_523977.2 bHLH-O_hairy_like 30..88 CDD:381483 28/57 (49%)
ORANGE 106..141 CDD:128787 11/38 (29%)
her8aNP_955918.4 None

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