Protein Alignment h and her6

DIOPT Version :9

• Sequence 1: NP_001014577.1
• Gene: h / 38995
• FlyBaseID: FBgn0001168
• Length: 337
• Species: Drosophila melanogaster
• Sequence 2: NP_571154.2
• Gene: her6 / 30288
• ZFINID: ZDB-GENE-980526-144
• Length: 270
• Species: Danio rerio
• Alignment Length: 353
• Identity: 105/353 - (29%)
• Similarity: 145/353 - (41%)
• Gaps: 129/353 - (36%)

  Fly    17 AVVPAQLKETPLK-----SDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKAD 76
            |..||.:..||.|     ..|:|:|||||||||||||..|.:||||||||.|||.:|||||||||
Zfish    15 AATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKAD 79

  Fly    77 ILEKTVKHLQELQRQQAAMQQAADPKIVNKFKAGFADCVNEVSRF----PGIEPAQRRRLLQHLS 137
            |||.|||||:.:||.|.......||.::.|::|||::|:|||:||    .|:....|.|||.||:
Zfish    80 ILEMTVKHLRNMQRAQMTAALNTDPTVLGKYRAGFSECMNEVTRFLSTCEGVNTEVRTRLLGHLA 144

  Fly   138 NCINGVKTELHQQQRQQQQQSIHAQMLPSPPSSPEQDSQQGAAAPYLFGIQQTASGYFLPNGMQV 202
            :|:..:....:..|.|          :|:.|..|.                       ....|..
Zfish   145 SCMTQINAMNYPTQHQ----------IPAGPPHPS-----------------------FSQPMVQ 176

  Fly   203 IPTKLPNGSIALVLPQSLPQQQQQQLLQHQQQQQQLAVAAAAAAAAAAQQQPMLVSMPQRTASTG 267
            ||                                            :|.||..:|.:......:|
Zfish   177 IP--------------------------------------------SATQQANVVPLSGVPCKSG 197

  Fly   268 SASSHSS------AGYESAPGSSS-------SCSYAPPSP-----ANSSYEPMDI-----KPSVI 309
            |:|:.:|      .|::..|.:..       :.::||..|     ||:|..|:.:     .|||
Zfish   198 SSSNLTSDATKVYGGFQLVPATDGQFAFLIPNAAFAPNGPVIPVYANNSNTPVPVAVSPGAPSV- 261

  Fly   310 QRVPMEQQPLSLVIKKQIKEEEQPWRPW 337
                               ..:..||||
Zfish   262 -------------------TSDSVWRPW 270

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
h	NP_001014577.1	HLH	29..88	CDD:238036	45/63 (71%)
		ORANGE	106..141	CDD:128787	18/38 (47%)
her6	NP_571154.2	HLH	32..95	CDD:238036	46/62 (74%)
		Hairy_orange	110..148	CDD:284859	17/37 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	92	1.000	Domainoid score	I7581
eggNOG	1	0.900	-	-		E1_KOG4304
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1427802at2759
OrthoFinder	1	1.000	-	-		FOG0000785
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_105205
Panther	1	1.100	-	-	O	PTHR10985
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X3450
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	10	9.820