DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hry and her1

DIOPT Version :10

Sequence 1:NP_523977.2 Gene:hry / 38995 FlyBaseID:FBgn0001168 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_571153.1 Gene:her1 / 30287 ZFINID:ZDB-GENE-980526-125 Length:328 Species:Danio rerio


Alignment Length:374 Identity:85/374 - (22%)
Similarity:142/374 - (37%) Gaps:101/374 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VVPAQLKETPLKSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTV 82
            |.|......|.|   |..||::||:||.|||..|.||:||:||.|.....::.|||||:|||..|
Zfish     2 VTPKMASRRPTK---RILKPVIEKKRRDRINQRLEELRTLLLDNTLDSRLQNPKLEKAEILELAV 63

  Fly    83 KHLQ----ELQRQQAAMQQAADPK---IVNK-----------------------FKAGFADCVNE 117
            ::::    ..:.|..:.:...|||   ::::                       :||||.:|::.
Zfish    64 EYIRTKTATARDQGDSSKDTHDPKPPPLLSRRPQMPCASIPESIQTHNSPSNPIYKAGFKECISR 128

  Fly   118 VSRF-PGIEPAQRRRLLQHLSNCINGVKTELHQQQRQQQQQSIHAQMLPSPPSSPEQDSQ----- 176
            .:.| ..:||:||...:|.|.:.::...:.|  ...:......|...:|:|..|...|.|     
Zfish   129 SASFIDCVEPSQRDSFVQGLCHHLDSYSSAL--PHGRVSSNPTHHPWIPNPELSCRTDVQSIGHM 191

  Fly   177 QGAAAPYLFGIQQTASGYFLPNGMQVIPTKLPNGSIALVLPQSLPQQQQQQLLQHQQQQQQLAVA 241
            :....||.:     |:..:..:.|.:.||.                       ||.......:::
Zfish   192 RANPEPYSY-----ANSLYPKSFMHLHPTG-----------------------QHPYLSPPYSIS 228

  Fly   242 -----AAAAAAAAAQQQPMLVSMPQRTASTGSASSHSSAGYESAPGSSSSCSYAP----PSPANS 297
                 ..::::......|..:|:|.:.....|.|.||:....|:..|:.|.|...    |.|...
Zfish   229 PPPSPGFSSSSPPFSSSPTYLSVPCQFPFPPSISPHSTDSSSSSTLSTVSLSTTSLPVVPGPHLQ 293

  Fly   298 SYEPMDIK---------PSVIQRVPMEQQPLSLVIKKQIKEEEQPWRPW 337
            ...|..::         |..::|.....|||              ||||
Zfish   294 VSSPTRVRFSGSVQSSQPRTLRRALFHNQPL--------------WRPW 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hryNP_523977.2 bHLH-O_hairy_like 30..88 CDD:381483 27/61 (44%)
ORANGE 106..141 CDD:128787 12/58 (21%)
her1NP_571153.1 bHLH_SF 13..73 CDD:469605 28/62 (45%)
Hairy_orange 118..157 CDD:462193 12/38 (32%)

Return to query results.
Submit another query.