DRSC/TRiP Functional Genomics Resources

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Protein Alignment h and Bhlhe41

DIOPT Version :9

Sequence 1:NP_001014577.1 Gene:h / 38995 FlyBaseID:FBgn0001168 Length:337 Species:Drosophila melanogaster
Sequence 2:XP_038964817.1 Gene:Bhlhe41 / 117095 RGDID:70900 Length:410 Species:Rattus norvegicus


Alignment Length:383 Identity:95/383 - (24%)
Similarity:141/383 - (36%) Gaps:114/383 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 LKETPLKSDRRSNKPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQ- 86
            ||....|...:....::||:||.|||.|:.:||.|:.:..|.....|  ||||.:||.|:|||: 
  Rat    36 LKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGH--LEKAVVLELTLKHLKA 98

  Fly    87 -----ELQRQQAAMQQAADPKI-------VNKFKAGFADCVNEV----SRFPGIEPAQRR--RLL 133
                 |.|.|:....|..:..:       ::.|.:||..|..||    :||....|.:.|  :|:
  Rat    99 LTALTEQQHQKIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLARFESWTPREPRCAQLV 163

  Fly   134 QHLSNCINGVKTELHQQQ---------------------RQQQQQSIHAQMLPSPPSSPEQD--- 174
            .||    :.|.|:|...|                     .::..:.:.......|.:.||.|   
  Rat   164 SHL----HAVATQLLTPQVTPGRGPGRAPCSAGAAAASGSERVARCVPVIQRTQPGTEPEHDTDT 224

  Fly   175 -------SQQGAAAPYLFGIQQTASGYFLP---------NGMQVIPTKLPNGSIALV-------- 215
                   ::||.||     ::|...|...|         .|..:.|.....||:..:        
  Rat   225 DSGYGGEAEQGRAA-----VKQEPPGDPSPAPKRLKLEARGALLGPEPALLGSLVALGGGAPFAQ 284

  Fly   216 -------LPQSLPQQQQQQLLQHQQQQQQL------AVAA----------AAAAAAAAQQQPMLV 257
                   ||..|........:|....:..|      |.||          ||||||||...|.|.
  Rat   285 PAAAPFCLPFYLLSPSAAAYVQPWLDKSGLDKYLYPAAAAPFPLLYPGIPAAAAAAAAAAFPCLS 349

  Fly   258 SM----PQRTASTGSASSHSSAGYESAPGSSSSCSYAPPSPANS-SYEPMDIKPSVIQ 310
            |:    |::   .|||:......:|.||..|     ..|..|:| ::.|..:.|...|
  Rat   350 SVLSPPPEK---AGSAAGAPFLAHEVAPPGS-----LRPQHAHSRTHLPHAVNPESSQ 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hNP_001014577.1 HLH 29..88 CDD:238036 24/64 (38%)
ORANGE 106..141 CDD:128787 13/40 (33%)
Bhlhe41XP_038964817.1 bHLH-O_DEC2 31..122 CDD:381593 30/87 (34%)
ORANGE 129..175 CDD:128787 16/49 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10985
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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