| Sequence 1: | NP_648251.1 | Gene: | Pex7 / 38994 | FlyBaseID: | FBgn0035922 | Length: | 339 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001415768.1 | Gene: | Cop1 / 360860 | RGDID: | 1304773 | Length: | 733 | Species: | Rattus norvegicus |
| Alignment Length: | 184 | Identity: | 44/184 - (23%) |
|---|---|---|---|
| Similarity: | 68/184 - (36%) | Gaps: | 62/184 - (33%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 76 VAWCPYAADIAATASGDGSLQIWCGLDGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTL 140
Fly 141 LSGSWDCTLKLWDCNRQNSITT------------------------------------------- 162
Fly 163 FVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKP--LMSIEAHASE 214 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Pex7 | NP_648251.1 | WD40 | 53..328 | CDD:475233 | 44/184 (24%) |
| WD40 repeat | 74..121 | CDD:293791 | 7/44 (16%) | ||
| WD40 repeat | 126..164 | CDD:293791 | 13/80 (16%) | ||
| WD40 repeat | 171..209 | CDD:293791 | 16/39 (41%) | ||
| WD40 repeat | 215..251 | CDD:293791 | 44/184 (24%) | ||
| WD40 repeat | 259..296 | CDD:293791 | |||
| WD40 repeat | 303..328 | CDD:293791 | |||
| Cop1 | NP_001415768.1 | RING-HC_COP1 | 134..180 | CDD:438167 | |
| PLN00181 | <242..733 | CDD:177776 | 44/184 (24%) | ||
| WD40 repeat | 475..512 | CDD:293791 | 7/43 (16%) | ||
| WD40 repeat | 519..555 | CDD:293791 | 13/36 (36%) | ||
| WD40 repeat | 560..598 | CDD:293791 | 0/37 (0%) | ||
| WD40 repeat | 604..643 | CDD:293791 | 17/44 (39%) | ||
| WD40 repeat | 647..669 | CDD:293791 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||