DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arr2 and arr3b

DIOPT Version :9

Sequence 1:NP_523976.1 Gene:Arr2 / 38993 FlyBaseID:FBgn0000121 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_957086.1 Gene:arr3b / 796867 ZFINID:ZDB-GENE-030616-74 Length:362 Species:Danio rerio


Alignment Length:359 Identity:142/359 - (39%)
Similarity:214/359 - (59%) Gaps:16/359 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVFKKATPNGKVTFYLGRRDFIDHIDYCDPVDGVIVVEPDYLKNRKVFGQLATTYRYGREEDEVM 70
            ||:||.:.||.:..|||||||:||::..|.||||:.::|..|..|||:.|||..:|||||:.:|:
Zfish     3 KVYKKTSGNGSLCLYLGRRDFVDHVESVDSVDGVLKIDPSGLNGRKVWVQLACAFRYGREDLDVI 67

  Fly    71 GVKFSKELILCREQIVPMTNPNMEMTPMQEKLVRKLGSNAYPFTFHFPPNSPSSVTLQQEGDDNG 135
            ||.|.|::.:.|.|:.|........|||||.|::|.|...:||||..|.:.|.||:||...:|.|
Zfish    68 GVSFRKDIWIKRIQMYPFEGTKPPNTPMQEALLKKAGDQGHPFTFDIPVHLPCSVSLQPAPEDAG 132

  Fly   136 KPLGVEYTIRAFVGDSE---DDRQHKRSMVSLVIKKLQYAP--LNRGQRLPSSLVSKGFTFSNGK 195
            ||.||:|.::|::.:.|   |::..|:....|:|:|:||||  |..|   |.:.::|.|..::..
Zfish   133 KPCGVDYEVKAYIANEEDNIDEKVEKKDTCRLIIRKIQYAPAELAAG---PKADINKQFITADKP 194

  Fly   196 ISLEVTLDREIYYHGEKTAATVQVSNNSKKSVKSIKCFIVQHTEITMVNAQFSKHVAQLETKEGC 260
            |.:||::::|:||||:.....|:|:|.:.|.||.||..|.|.|:: ::.|....|...|..:.|.
Zfish   195 IHMEVSMEKELYYHGDPIPIKVKVNNETSKVVKKIKINIFQITDV-VIYAADKYHKCVLNEEFGD 258

  Fly   261 PITPGANLTKTFYLIPLAANNKDRHGIALDGHLKDEDVNLASSTMVQEGKSTGDACGIVISYSVR 325
            .|...:...|.:.:.||..|||::.|:||||.|||||.||||||::...... ...|:|:||.::
Zfish   259 QINANSTFEKEYSVTPLLVNNKEKRGLALDGRLKDEDTNLASSTLLIPDMDK-QMQGVVVSYKIK 322

  Fly   326 I--KLNCGTLGGEMQTDV----PFKLLQPAPGTI 353
            :  .:..|.||....:||    |..|:.|.|..|
Zfish   323 VILMMGGGLLGSLTSSDVTAELPLVLMSPKPAEI 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr2NP_523976.1 Arrestin_N 17..172 CDD:278754 68/157 (43%)
Arrestin_C 192..350 CDD:214976 58/163 (36%)
arr3bNP_957086.1 Arrestin_N 16..172 CDD:278754 68/155 (44%)
Arrestin_C 192..353 CDD:214976 58/162 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52566
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.030

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