DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arr2 and saga

DIOPT Version :9

Sequence 1:NP_523976.1 Gene:Arr2 / 38993 FlyBaseID:FBgn0000121 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_956853.1 Gene:saga / 792319 ZFINID:ZDB-GENE-040426-1538 Length:392 Species:Danio rerio


Alignment Length:383 Identity:157/383 - (40%)
Similarity:239/383 - (62%) Gaps:13/383 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFKKATPNGKVTFYLGRRDFIDHIDYCDPVDGVIVVEPDYLKNRKVFGQLATTYRYGREED-EVM 70
            ||||.:.:..|..|:|:|||:|.:|..|||||||:::|:.|:.:|.:..|:..:||||::| ||:
Zfish     7 VFKKISKDKSVGVYMGKRDFVDRVDSVDPVDGVILIDPEQLRGKKAYVTLSCVFRYGRDDDAEVL 71

  Fly    71 GVKFSKELILCREQIVPMTNPNME--MTPMQEKLVRKLGSNAYPFTFHFPPNSPSSVTLQQEGDD 133
            |:.|.||:.:...|:.|......:  :|.:||||:||||.|||||.|.||.|.|.||.||....|
Zfish    72 GISFRKEIYISTRQVYPALQDKEQCILTKVQEKLLRKLGDNAYPFFFEFPDNLPCSVGLQPAPKD 136

  Fly   134 NGKPLGVEYTIRAFVGDSEDDRQHKRSMVSLVIKKLQYAPLNRGQRLPSSLVSKGFTFSNGKISL 198
            .||...||:.::||..:|:|.:..|||.|.|:|:|:||||...|. .||...::.|..|:..:.|
Zfish   137 VGKHCAVEFEVKAFCAESQDAKVRKRSSVGLMIRKVQYAPEKLGP-APSVETTRDFLMSDKPLHL 200

  Fly   199 EVTLDREIYYHGEKTAATVQVSNNSKKSVKSIKCFIVQHTEITM-VNAQFSKHVAQLETKEGCPI 262
            |.:|:::.|||||.....|:::|.|.|:|::|...:.|:..:.: .|..:.|.||..::  |..:
Zfish   201 EASLEKQTYYHGEPINVRVKINNQSNKNVRNIILSVEQNANVVLYCNDNYMKVVATEDS--GHSV 263

  Fly   263 TPGANLTKTFYLIPLAANNKDRHGIALDGHLKDEDVNLASSTMVQEGKSTGDACGIVISYSVRIK 327
            ..||.|.|.:.|:||.|||::|.||||||.||.||.|||||::::||... :..||::||.|.:|
Zfish   264 DSGAKLEKVYTLLPLLANNRERRGIALDGKLKHEDTNLASSSIIKEGVQK-EVLGIMVSYRVVVK 327

  Fly   328 LNCGTLGG--EMQTDVPFKLLQPAPGTIEKKRSNAMKKMKSIEQHRN-VKGYYQDDDD 382
            |..|.:.|  |:..::||:|:.|.|..:  |.|.|.::|...|..|. :||..:|:|:
Zfish   328 LIVGGMMGSSEVGVELPFQLMHPKPDAV--KESEAEEEMVFEEFKRTYLKGMPEDEDE 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr2NP_523976.1 Arrestin_N 17..172 CDD:278754 72/157 (46%)
Arrestin_C 192..350 CDD:214976 63/160 (39%)
sagaNP_956853.1 Arrestin_N 17..175 CDD:304627 72/157 (46%)
Arrestin_C 194..352 CDD:214976 63/160 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3865
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52566
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.930

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