DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arr2 and krz

DIOPT Version :9

Sequence 1:NP_523976.1 Gene:Arr2 / 38993 FlyBaseID:FBgn0000121 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001247400.1 Gene:krz / 53554 FlyBaseID:FBgn0040206 Length:470 Species:Drosophila melanogaster


Alignment Length:420 Identity:182/420 - (43%)
Similarity:268/420 - (63%) Gaps:31/420 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVKVFKKATPNGKVTFYLGRRDFIDHIDYCDPVDGVIVVEPDYLKNRKVFGQLATTYRYGREEDE 68
            :.:||||::.|||:|.|||:|||:||:.:.||:|||:.::|:|:|:||||||:...:|||||:.:
  Fly    46 ATRVFKKSSSNGKITVYLGKRDFVDHVTHVDPIDGVVFIDPEYVKDRKVFGQVLAAFRYGREDLD 110

  Fly    69 VMGVKFSKELILCREQIVPMTNPNMEMTPMQEKLVRKLGSNAYPFTFHFPPNSPSSVTLQQEGDD 133
            |:|:.|.|:|.|..|||.|....:..||.:||:|::|||.||:||.|..||..|:||:||....|
  Fly   111 VLGLTFRKDLYLAHEQIYPPMQLDRPMTRLQERLIKKLGPNAHPFYFEVPPYCPASVSLQPAPGD 175

  Fly   134 NGKPLGVEYTIRAFVGDSEDDRQHKRSMVSLVIKKLQYAPLNRGQRLPSSLVSKGFTFSNGKISL 198
            .||..||:|.::||||::.:|:.|||:.|.|.|:|:.|||...|:: ||..|||.|.....||.|
  Fly   176 VGKSCGVDYELKAFVGENVEDKPHKRNSVRLTIRKVMYAPSKVGEQ-PSIEVSKEFMMKPNKIHL 239

  Fly   199 EVTLDREIYYHGEKTAATVQVSNNSKKSVKSIKCFIVQHTEITMVN-AQFSKHVAQLETKEGCPI 262
            |.|||:|:|:||||.:..|.|:|||.::||.||..:.|..:|.:.: ||:...||::|:::||.:
  Fly   240 EATLDKELYHHGEKISVNVHVANNSNRTVKKIKVCVRQFADICLFSTAQYKSVVAEIESEDGCQV 304

  Fly   263 TPGANLTKTFYLIPLAANNKDRHGIALDGHLKDEDVNLASSTMVQEGKSTGDACGIVISYSVRIK 327
            .||..|:|.|.|.||.|||||:.|:||||.||.||.||||||:: ...:..::.||::.|.|::|
  Fly   305 APGFTLSKVFELCPLLANNKDKWGLALDGQLKHEDTNLASSTLI-TNPAQRESLGIMVHYKVKVK 368

  Fly   328 L--NCGTLGGEMQTDVPFKLLQPAP--------GTIEKKRSNA-----MKKMKSIEQHRNVKG-- 375
            |  :...|.|::..::||.|:.|.|        |....:.|.|     :..|...|......|  
  Fly   369 LLISSPLLNGDLVAELPFTLMHPKPEEEEHPLLGERSPRASLAGGGLPLVSMSDGETESATGGQD 433

  Fly   376 --------YYQDD---DDNIVFEDFAKMRM 394
                    ...||   ||:|:|||||::|:
  Fly   434 VPTTTNLIQLDDDEAQDDDIIFEDFARLRL 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr2NP_523976.1 Arrestin_N 17..172 CDD:278754 76/154 (49%)
Arrestin_C 192..350 CDD:214976 71/160 (44%)
krzNP_001247400.1 Arrestin_N 59..214 CDD:419887 76/154 (49%)
Arrestin_C 233..393 CDD:214976 71/160 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45470073
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3865
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.802101 Normalized mean entropy S2648
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.800

Return to query results.
Submit another query.