DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arr2 and Arrb2

DIOPT Version :9

Sequence 1:NP_523976.1 Gene:Arr2 / 38993 FlyBaseID:FBgn0000121 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001258287.1 Gene:Arrb2 / 216869 MGIID:99474 Length:421 Species:Mus musculus


Alignment Length:418 Identity:176/418 - (42%)
Similarity:267/418 - (63%) Gaps:32/418 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVFKKATPNGKVTFYLGRRDFIDHIDYCDPVDGVIVVEPDYLKNRKVFGQLATTYRYGREEDEVM 70
            :||||::||.|:|.|||:|||:||:|..||||||::|:|||||:||||..|...:|||||:.:|:
Mouse     8 RVFKKSSPNCKLTVYLGKRDFVDHLDKVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGREDLDVL 72

  Fly    71 GVKFSKELILCREQ-IVPMTNPNMEMTPMQEKLVRKLGSNAYPFTFHFPPNSPSSVTLQQEGDDN 134
            |:.|.|:|.:...| ..||.||....|.:|::|::|||.:|:||.|..|.|.|.|||||...:|.
Mouse    73 GLSFRKDLFIATYQAFPPMPNPPRPPTRLQDRLLKKLGQHAHPFFFTIPQNLPCSVTLQPGPEDT 137

  Fly   135 GKPLGVEYTIRAFVGDSEDDRQHKRSMVSLVIKKLQYAPLNRGQRLPSSLVSKGFTFSNGK-ISL 198
            ||..||::.||||...|.:::.|||:.|.|:|:|:|:||...|.: ||:..::.|..|:.: :.|
Mouse   138 GKACGVDFEIRAFCAKSIEEKSHKRNSVRLIIRKVQFAPETPGPQ-PSAETTRHFLMSDRRSLHL 201

  Fly   199 EVTLDREIYYHGEKTAATVQVSNNSKKSVKSIKCFIVQHTEITMVN-AQFSKHVAQLETKEGCPI 262
            |.:||:|:|||||.....|.|:|||.|:||.|:..:.|:.:|.:.: ||:...|||||..:  .:
Mouse   202 EASLDKELYYHGEPLNVNVHVTNNSAKTVKKIRVSVRQYADICLFSTAQYKCPVAQLEQDD--QV 264

  Fly   263 TPGANLTKTFYLIPLAANNKDRHGIALDGHLKDEDVNLASSTMVQEGKSTGDACGIVISYSVRIK 327
            :|.:...|.:.:.||.::|:::.|:||||.||.||.||||||:|:|| :..:..||::||.|::|
Mouse   265 SPSSTFCKVYTITPLLSDNREKRGLALDGQLKHEDTNLASSTIVKEG-ANKEVLGILVSYRVKVK 328

  Fly   328 LNCGTLGGEMQTDVPFKLLQPAPG---TIEKKRS----------NAMKK------MKSIEQHRNV 373
            | ..:.||::..::||.|:.|.|.   |:.:.:|          :|.::      ...||...| 
Mouse   329 L-VVSRGGDVSVELPFVLMHPKPHDHITLPRPQSAPIHPPLLCPSAPRETDVPVDTNLIEFDTN- 391

  Fly   374 KGYYQDDDDNIVFEDFAKMRMNNVNMAD 401
               |..||| |||||||::|:..:...|
Mouse   392 ---YATDDD-IVFEDFARLRLKGMKDDD 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr2NP_523976.1 Arrestin_N 17..172 CDD:278754 78/155 (50%)
Arrestin_C 192..350 CDD:214976 65/159 (41%)
Arrb2NP_001258287.1 Arrestin_N 19..175 CDD:334019 78/155 (50%)
Arrestin_C 199..350 CDD:214976 64/154 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3865
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.802101 Normalized mean entropy S2648
OMA 1 1.010 - - QHG52566
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.880

Return to query results.
Submit another query.