DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arr2 and arr-1

DIOPT Version :9

Sequence 1:NP_523976.1 Gene:Arr2 / 38993 FlyBaseID:FBgn0000121 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_508183.1 Gene:arr-1 / 180446 WormBaseID:WBGene00000195 Length:435 Species:Caenorhabditis elegans


Alignment Length:418 Identity:174/418 - (41%)
Similarity:264/418 - (63%) Gaps:28/418 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KVFKKATPNGKVTFYLGRRDFIDHIDYCDPVDGVIVVEPDYLK-NRKVFGQLATTYRYGREEDEV 69
            :||||.:||||:|.|||:|||||..||.|.:||:::::.:|:| ||||...|...:|||||:.:|
 Worm    11 RVFKKTSPNGKITTYLGKRDFIDRGDYVDLIDGMVLIDEEYIKDNRKVTAHLLAAFRYGREDLDV 75

  Fly    70 MGVKFSKELILCREQIVPMTNPNME--MTPMQEKLVRKLGSNAYPFTFHFPPNSPSSVTLQQEGD 132
            :|:.|.|:||....|:.|.|:.::.  ::.:||:|.||||:||:||.|...|.|.||||||....
 Worm    76 LGLTFRKDLISETFQVYPQTDKSISRPLSRLQERLKRKLGANAFPFWFEVAPKSASSVTLQPAPG 140

  Fly   133 DNGKPLGVEYTIRAFVG--DSEDDRQHKRSMVS----LVIKKLQYAPL-NRGQRLPSSLVSKGFT 190
            |.|||.||:|.::.||.  |.....:.|:|.:|    |.|:||.|||. :|.|  |...|||.|.
 Worm   141 DTGKPCGVDYELKTFVAVTDGSSGEKPKKSALSNTVRLAIRKLTYAPFESRPQ--PMVDVSKYFM 203

  Fly   191 FSNGKISLEVTLDREIYYHGEKTAATVQVSNNSKKSVKSIKCFIVQHTEITM-VNAQFSKHVAQL 254
            .|:|.:.:||:||:|:|||||..:..|.:.|||.|:||.:|.:|:|..:|.: ..|.:|..||::
 Worm   204 MSSGLLHMEVSLDKEMYYHGESISVNVHIQNNSNKTVKKLKIYIIQVADICLFTTASYSCEVARI 268

  Fly   255 ETKEGCPITPGANLTKTFYLIPLAANNKDRHGIALDGHLKDEDVNLASSTMVQEGKSTGDACGIV 319
            |:.||.|:.||..|:|.|.:.||.:||||:.|:||||.||.||.||||||:: :.|::.::.|||
 Worm   269 ESNEGFPVGPGGTLSKVFAVCPLLSNNKDKRGLALDGQLKHEDTNLASSTIL-DSKTSKESLGIV 332

  Fly   320 ISYSVRIKLNCGTLGGEMQTDVPFKLLQPAPGTIEKKRSNAMKKMKS-----------IEQHRNV 373
            :.|.|:::...|.|.||:..::||.|....|....::....:..:::           |:.|..:
 Worm   333 VQYRVKVRAVLGPLNGELFAELPFTLTHSKPPESPERTDRGLPSIEATNGSEPVDIDLIQLHEEL 397

  Fly   374 KGYYQDDDDNIVFEDFAKMRMNNVNMAD 401
            :..|   ||:::|||||:||::..:..|
 Worm   398 EPRY---DDDLIFEDFARMRLHGNDSED 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr2NP_523976.1 Arrestin_N 17..172 CDD:278754 72/163 (44%)
Arrestin_C 192..350 CDD:214976 70/158 (44%)
arr-1NP_508183.1 Arrestin_N 22..186 CDD:278754 72/163 (44%)
Arrestin_C 205..363 CDD:214976 70/158 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3865
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.802101 Normalized mean entropy S2648
OMA 1 1.010 - - QHG52566
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11792
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.880

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