DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arr2 and arrb2

DIOPT Version :9

Sequence 1:NP_523976.1 Gene:Arr2 / 38993 FlyBaseID:FBgn0000121 Length:401 Species:Drosophila melanogaster
Sequence 2:XP_031753380.1 Gene:arrb2 / 100101741 XenbaseID:XB-GENE-481084 Length:426 Species:Xenopus tropicalis


Alignment Length:402 Identity:174/402 - (43%)
Similarity:262/402 - (65%) Gaps:18/402 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SVKVFKKATPNGKVTFYLGRRDFIDHIDYCDPVDGVIVVEPDYLKNRKVFGQLATTYRYGREEDE 68
            :|:||||::||.|:|.|||:|||:||:|..||||||::|:.||||:|||:..|...:|||||:.:
 Frog    24 AVRVFKKSSPNCKLTVYLGKRDFVDHLDRVDPVDGVVLVDTDYLKDRKVYVTLTCAFRYGREDLD 88

  Fly    69 VMGVKFSKELILCREQIV-PMTNPNMEMTPMQEKLVRKLGSNAYPFTFHFPPNSPSSVTLQQEGD 132
            |:|:.|.|:|.:.:.|.. |:......:|.:||:|::|||..|:||.|..|.|.|.|||||...:
 Frog    89 VLGLSFRKDLFISKFQAYPPLPEEKKPLTRLQERLIKKLGEQAHPFFFTIPQNLPCSVTLQPGPE 153

  Fly   133 DNGKPLGVEYTIRAFVGDSEDDRQHKRSMVSLVIKKLQYAPLNRGQRLPSSLVSKGFTFSNGKIS 197
            |.||..||:|.||||...:.:::.|||:.|.|||:|:|:||...|.: |.:..::.|..|:..:.
 Frog   154 DTGKACGVDYEIRAFCAKTMEEKMHKRNSVRLVIRKVQFAPEKPGPQ-PVAETTRHFLMSDRSLH 217

  Fly   198 LEVTLDREIYYHGEKTAATVQVSNNSKKSVKSIKCFIVQHTEITMVN-AQFSKHVAQLETKEGCP 261
            ||.:||:|:|||||.....|.|:|||.|:||.:|..:.|:.:|.:.: ||:...|||:|..:  .
 Frog   218 LEASLDKELYYHGEPINVNVHVTNNSSKTVKRVKVSVRQYADICLFSTAQYKCPVAQIEQDD--Q 280

  Fly   262 ITPGANLTKTFYLIPLAANNKDRHGIALDGHLKDEDVNLASSTMVQEGKSTGDACGIVISYSVRI 326
            :||.:...|.:.|.||.:||:::.|:||||.||.||.||||||:|:|| |:.:..||::||.|::
 Frog   281 VTPSSTFCKVYTLTPLLSNNREKRGLALDGKLKHEDTNLASSTIVKEG-SSKEVLGILVSYRVKV 344

  Fly   327 KLNCGTLGGEMQTDVPFKLLQPAP------GTIEKKRSNAMKKMKSIEQHRNVKGYYQDDDDNIV 385
            || ..:.||::..::||.|:.|.|      ...|..:::|......||...|   :.||||  ||
 Frog   345 KL-VVSRGGDVAVELPFVLMHPKPPENISRPLSEYPQTDAPVDTNLIEFDTN---FAQDDD--IV 403

  Fly   386 FEDFAKMRMNNV 397
            |||||::|:..:
 Frog   404 FEDFARLRLKGL 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arr2NP_523976.1 Arrestin_N 17..172 CDD:278754 75/155 (48%)
Arrestin_C 192..350 CDD:214976 68/158 (43%)
arrb2XP_031753380.1 Arrestin_N 37..193 CDD:395268 75/155 (48%)
Arrestin_C 212..367 CDD:214976 68/158 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D340461at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11792
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

Return to query results.
Submit another query.