DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc6 and ORC1A

DIOPT Version :10

Sequence 1:NP_648247.1 Gene:Cdc6 / 38989 FlyBaseID:FBgn0035918 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_567440.1 Gene:ORC1A / 827121 AraportID:AT4G14700 Length:809 Species:Arabidopsis thaliana


Alignment Length:860 Identity:189/860 - (21%)
Similarity:313/860 - (36%) Gaps:311/860 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SISKATAASPLPPSTQTP-RRSEVWKRRQPKKVLADSDEEEEVVTAIYDLTSPVSENNENRNVLN 75
            |.|..:...|..|.|.|| |||   .|...:|:...:|.        .||  |..|:.|..|::.
plant    29 SPSSTSLTPPQTPETLTPLRRS---SRHVSRKINLGNDP--------IDL--PGKESVEEINLIR 80

  Fly    76 KMDKISRRRTSQVQVAQ-----------SELPKTP-RS-TKKTVQSAGSSRAKR----------- 116
            |    .|:||:.:.||:           |..|.:| || ||||      .:.||           
plant    81 K----PRKRTNDIVVAEKSKKKKIDPEVSFSPVSPIRSETKKT------KKKKRVYYNKVEFDET 135

  Fly   117 -------------EEENREATARFLEGEQDSEV-------------------DPLHG-------- 141
                         |:.|.:.     |.|:|.|:                   |.|.|        
plant   136 EFEIGDDVYVKRTEDANPDE-----EEEEDPEIEDCQICFKSHTNTIMIECDDCLGGFHLNCLKP 195

  Fly   142 ----------------------------SPPKQRKL-QPLPQHLISPSRLLDRLSIDERQEEEVE 177
                                        .||:.:|| :.:.:.|:|......|:   |:..:||:
plant   196 PLKEVPEGDWICQFCEVKKSGQTLVVVPKPPEGKKLARTMKEKLLSSDLWAARI---EKLWKEVD 257

  Fly   178 ATTH---------KTETAEQQPKHQAKDE-----------------------AKPRPKQQED--- 207
            ...:         ..||...:.:|..|.|                       .|...|...|   
plant   258 DGVYWIRARWYMIPEETVLGRQRHNLKRELYLTNDFADIEMECVLRHCFVKCPKEFSKASNDGDD 322

  Fly   208 -------------------PLAQKQQEKPPTKQPNKNQTKEKSN--IQTNEETQQNNLPSPSRNK 251
                               .||...::........|.:..:.|:  |:.::|.....: |.|:..
plant   323 VFLCEYEYDVHWGSFKRVAELADGDEDSDQEWNGRKEEEIDYSDEEIEFDDEESVRGV-SKSKRG 386

  Fly   252 YQNARR--------------------------------VLNSAETQNLPGRESQLQELREFFSNH 284
            ..|:|:                                :|.:...::||.|..:::|:..|....
plant   387 GANSRKGRFFGLEKVGMKRIPEHVRCHKQSELEKAKATLLLATRPKSLPCRSKEMEEITAFIKGS 451

  Fly   285 L-ESQTSG-SLYVSGQPGTGKT-ACLSLLLRDPDFSKRLQR------------VYINCTSIASVG 334
            : :.|..| .:|:.|.|||||| :.||::       |.|:.            |.||...:||..
plant   452 ISDDQCLGRCMYIHGVPGTGKTISVLSVM-------KNLKAEVEAGSVSPYCFVEINGLKLASPE 509

  Fly   335 AVYKKLCTELQLKVSGRTE--RDHLEAIQRHLKTAKRM-------LLLVLDEIDQLCTSRQEVLY 390
            .:|..:...|    ||...  :..|:::.......|::       .:|::||:|.|.|..|.|||
plant   510 NIYSVIYEGL----SGHRVGWKKALQSLNERFAEGKKIGKENEKPCILLIDELDVLVTRNQSVLY 570

  Fly   391 TIFEWPALPGSRILLVGIANSLDLTDRALMRLNARCELKPRLMHFPPYSKQQIVEIFKSRLAEAE 455
            .|.:||..|.|:::::||||::||.::.|.|:::|..:: ||. |.||:.:|:.||..:||   |
plant   571 NILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMGIQ-RLC-FGPYNHRQLQEIISTRL---E 630

  Fly   456 VLDVFPPVTLQLLAAKVSAISGDVRRALDIGRRVVEIAEQQKRDGEKEFNMKALQLEGKDAVEAK 520
            .::.|....::..:.||:|||||.||||:|.||..|:|         ::.:|      |..:.||
plant   631 GINAFEKTAIEFASRKVAAISGDARRALEICRRAAEVA---------DYRLK------KSNISAK 680

  Fly   521 EKQDTLKPVQVTQVAAVLNKVYGASQNLEEDIEASFPLQQKLMLCTLVLMLRNERNKDISMGRLH 585
            .:...:..|:|     .:.:::.|.   ...:..|.....::.|..:|                |
plant   681 SQLVIMADVEV-----AIQEMFQAP---HIQVMKSVSKLSRIFLTAMV----------------H 721

  Fly   586 EVYR---------RVCAKRNILALDQAE-FTG-------TVDLVETRGILRIMRKKEPRLHKVLL 633
            |:|:         ||....:.:.|...| |.|       ..||.|.|.:|....:|. ||.|:.|
plant   722 ELYKTGMAETSFDRVATTVSSICLTNGEAFPGWDILLKIGCDLGECRIVLCEPGEKH-RLQKLQL 785

  Fly   634 QWDEEEVHAALSDKQ 648
            .:..::|..||.|.:
plant   786 NFPSDDVAFALKDNK 800

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc6NP_648247.1 CDC6 256..646 CDD:441083 116/462 (25%)
ORC1ANP_567440.1 BAH_plant_2 187..341 CDD:240069 19/156 (12%)
PTZ00112 <419..723 CDD:240274 94/358 (26%)

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