DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cdc6 and ORC1B

DIOPT Version :10

Sequence 1:NP_648247.1 Gene:Cdc6 / 38989 FlyBaseID:FBgn0035918 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_192999.1 Gene:ORC1B / 826875 AraportID:AT4G12620 Length:813 Species:Arabidopsis thaliana


Alignment Length:879 Identity:188/879 - (21%)
Similarity:314/879 - (35%) Gaps:306/879 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAAVRRSTRLSSISK--------------ATAASPLPPSTQTP-RRSEVWKRRQPKKVLADSDEE 50
            ||:..|:....|.:|              :|:.:|..|.|.|| |||   .|...:|:...:|  
plant     1 MASTPRAKTFKSPTKTPSNIYRKSYLSPSSTSHTPQTPETHTPLRRS---ARHVSRKIDLGND-- 60

  Fly    51 EEVVTAIYDLTSPVSENNENRNVLNKMDKISRRRTSQVQVAQSELPKTPRSTKK--------TVQ 107
                    .:.:|.::..|..|::.|.::..|:.|:.|..::|:..:||:..||        .::
plant    61 --------PIDAPGNDPIEGMNLIRKRERAPRKPTTDVVPSKSKKTETPKKKKKIDSFTPVSPIR 117

  Fly   108 SAGSSRAKREEENREATARFLEGE----------------QDSEVDP------------------ 138
            |....:.|:::........|.|.|                .|.|.||                  
plant   118 SETIKKTKKKKRVYYNKVEFDETEFEIGDDVYVKRREDSNSDEEEDPEIEDCQICFKSDTNIMIE 182

  Fly   139 ----LHG-------------------------------------SPPKQRKL-QPLPQHLISPSR 161
                |.|                                     .||:.:|| :.:.:.|:|...
plant   183 CDDCLGGFHLKCLKPPLKEVPEGDWICQFCEVKKSGQSQTLDLPKPPEGKKLARTMREKLLSGDL 247

  Fly   162 LLDRLSIDERQEEEVEATTH---------KTETAEQQPKHQAKDE-------------------- 197
            ...|:   ::..:||:...:         ..||...:..|..|.|                    
plant   248 WAARI---DKLWKEVDDGVYWIRARWYMIPEETVSGRQPHNLKRELYLTNDFADIEMECILRHCS 309

  Fly   198 ---AKPRPKQQED-------------------PLAQKQQEKPPTKQPNKNQTKEKSNIQTNEETQ 240
               .|...|...|                   .||:.......:.| ..|..||:....::||.:
plant   310 VKCPKEFSKASNDGDDVFLCEYEYDVHWRSFKRLAELADGDSDSDQ-EWNGRKEEEVDDSDEEME 373

  Fly   241 -QNNLPSPSRNKYQNARRVLNS--------------------------------------AETQN 266
             .:.:....|....:||...||                                      ...::
plant   374 LDDEVLKSKRGGLTSARGGANSRKGRFFGVEKVGMKLIPEHVRCHKQSELEKAKATLLLATRPKS 438

  Fly   267 LPGRESQLQELREFFSNHL-ESQTSG-SLYVSGQPGTGKT-ACLSLLLRDPDFSKRLQR------ 322
            ||.|..:::|:..|....: :.|..| .:|:.|.|||||| :.||::       |.|:.      
plant   439 LPCRSKEMEEITSFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVM-------KNLKAEVEEGS 496

  Fly   323 ------VYINCTSIASVGAVYKKLCTELQLKVSGRTE--RDHLEAIQRHLKTAKRM-------LL 372
                  |.||...:||...:|..:...|    ||...  :..|:.:.......||:       .:
plant   497 VSPYCFVEINGLKLASPENIYSVIYEAL----SGHRVGWKKALQCLNERFAEGKRIGKEDEKPCI 557

  Fly   373 LVLDEIDQLCTSRQEVLYTIFEWPALPGSRILLVGIANSLDLTDRALMRLNARCELKPRLMHFPP 437
            |::||:|.|.|..|.|||.|.:||..|.|:::::||||::||.::.|.|:::|..:: ||. |.|
plant   558 LLIDELDLLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMGIQ-RLC-FGP 620

  Fly   438 YSKQQIVEIFKSRLAEAEVLDVFPPVTLQLLAAKVSAISGDVRRALDIGRRVVEIAEQQKRDGEK 502
            |:..|:.||..:||   ..:|.|....::..:.||:|||||.||||:|.||..|:|:.:....:.
plant   621 YNHTQLQEIISTRL---NGIDAFEKTAIEFASRKVAAISGDARRALEICRRAAEVADHRLNTNKS 682

  Fly   503 EFNMKALQLEGKDAVEAKEKQDTLKP-VQVTQVAAVLNKVYGASQNLEEDIEASFPLQQKLMLCT 566
            ..|...:..:    |||..::....| :||.:..:.|:|::                        
plant   683 AKNQLVIMAD----VEAAIQEMFQAPHIQVMKSVSKLSKIF------------------------ 719

  Fly   567 LVLMLRNERNKDISMGRLHEVYR---------RVCAKRNILALDQAE-FTG-------TVDLVET 614
            |..|             :||:|:         ||....:.:.|...| |.|       ..||.|.
plant   720 LTAM-------------VHELYKTGMAETTFDRVATTVSSICLTNGEAFPGWDILLKIGCDLGEC 771

  Fly   615 RGILRIMRKKEPRLHKVLLQWDEEEVHAALSDKQ 648
            |.||....:|. ||.|:.|.:..::|..||.|.:
plant   772 RIILCEPGEKH-RLQKLQLNFPSDDVAFALKDNK 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc6NP_648247.1 CDC6 256..646 CDD:441083 120/469 (26%)
ORC1BNP_192999.1 BAH_plant_2 189..344 CDD:240069 18/157 (11%)
PTZ00112 <424..727 CDD:240274 95/359 (26%)

Return to query results.
Submit another query.