DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cdc6 and Orc1

DIOPT Version :10

Sequence 1:NP_648247.1 Gene:Cdc6 / 38989 FlyBaseID:FBgn0035918 Length:662 Species:Drosophila melanogaster
Sequence 2:NP_808792.1 Gene:Orc1 / 313479 RGDID:631435 Length:848 Species:Rattus norvegicus


Alignment Length:711 Identity:178/711 - (25%)
Similarity:304/711 - (42%) Gaps:139/711 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 RLSSISKATAASPLPPSTQTPRRSEVWK----RRQP-----KKVLADSDEEEEVV---TAIYDLT 61
            |:.|....:.:...|..|.||...:..:    .|:|     :|:|.||.:.::..   .|..:.|
  Rat   205 RIESSHSTSRSYQDPAHTVTPNAMKSLECGGFTRKPNMRLSRKILCDSLDSQKTCKRRAAFSETT 269

  Fly    62 SP-----------------VSENNENRNVLNKMDKISRRRTSQVQVAQSELPKTPRSTKKTVQSA 109
            ||                 :.:|...:....|...:.|.|.:.|           ::||.||:||
  Rat   270 SPPKKPQPGEIKTSSALETLGKNGHTQPFFAKSSMVLRTRGTAV-----------KTTKLTVESA 323

  Fly   110 GSSRAKREEEN-------------REATARFLEGEQDSEVDPLHGSPPKQRK-----LQPLPQHL 156
            .|....|...:             |:|.      ||::..:|:|.|...:|:     |:.:.|.|
  Rat   324 LSPVRSRSRYSVAPSVGLTPQYIGRKAK------EQETHKEPIHTSLRARRRSSLLTLKRIKQQL 382

  Fly   157 ISPSRLLDRLSIDERQEEEVEATTHKTETAEQQPKHQAKDEAKPRPKQQEDPLAQ----KQQEKP 217
                .|||....|:.:||.:.:......::|::      ||:.|.|...: |:.|    :...||
  Rat   383 ----WLLDDDKSDQEEEESISSVEVSDSSSEEE------DESVPSPPTGK-PVGQSRTRRTASKP 436

  Fly   218 PTKQPNKNQTK---EKSNIQTNEETQQNNL--PSPSRNKYQNARRVLNSAETQNLPGRESQLQEL 277
            .::.|:|:..|   .:..:....:.:..||  ..|:....:...|:..||...:||.||.:.|::
  Rat   437 SSQTPSKSPKKTFRPRPPLHATPQIRDRNLAVQEPASVLEEARLRLHVSAVPDSLPCREQEFQDI 501

  Fly   278 REFFSNHLESQTSGSLYVSGQPGTGKTA-------CLSLLLRDPDFSKRLQRVYINCTSIASVGA 335
            ..|..:.|...|.|.:|:||.|||||||       ||....:..|... .:.|.:|...:.....
  Rat   502 YSFVESKLLDGTGGCMYISGVPGTGKTATVHEVIRCLQQAAQTNDVPP-FEYVEVNGMKLTEPHQ 565

  Fly   336 VYKKLCTELQLKVSGR--TERDHLEAIQRHL---KTAKRMLLLVLDEIDQLCTSRQEVLYTIFEW 395
            ||.::   || |::|:  |.....|.:.:..   .:.|...:|::||:|.|.|.:|:|||.:|:|
  Rat   566 VYVQI---LQ-KLTGQKATANHAAELLAKQFCSRGSQKETTVLLVDELDLLWTHKQDVLYNLFDW 626

  Fly   396 PALPGSRILLVGIANSLDLTDRALM-RLNARCELKPRLMHFPPYSKQQIVEIFKSRLAEAEVLDV 459
            |...|:|::::.|||::||.:|.:| |:.:|..|  ..|.|.|||..|:.:|..|||..   |..
  Rat   627 PTHKGARLVVLTIANTMDLPERIMMNRVASRLGL--TRMSFQPYSHSQLKQILVSRLKH---LKA 686

  Fly   460 FPPVTLQLLAAKVSAISGDVRRALDIGRRVVEIAEQQKRDGEKEFNMKALQLEGKDAVEAKEKQD 524
            |....:||:|.||:|:|||.||.|||.||..||.|...:.|:.:..:....|     :||.::..
  Rat   687 FEDDAVQLVARKVAALSGDARRCLDICRRATEICEVSHQRGDSQCLVTVAHL-----MEAIDEMF 746

  Fly   525 TLKPVQVTQVAAVLNKVYGASQNLEEDIEASFPLQQKLMLCTLVLMLRNERNKDISMGRLHEVYR 589
            :...:...:.::||              |.||          |..::...|...:......::|.
  Rat   747 SSSYITAIKNSSVL--------------EQSF----------LRAIIAEFRRSGLEEATFQQIYS 787

  Fly   590 RVCAKRNILALDQAEFTGTVDLVETRGILRIMRKKEPR---LHKVLLQWDEEEVHAALSDK 647
            :..|...:..|.....:.|:.:....|..||:..:..|   |.:|.|...:.:|..||.::
  Rat   788 QHVALCRMEGLPYPTMSETMAVCSRLGSCRILLVEPSRNDLLLRVRLNVSQNDVLYALKEE 848

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cdc6NP_648247.1 CDC6 256..646 CDD:441083 117/405 (29%)
Orc1NP_808792.1 BAH_Orc1p_animal 43..169 CDD:240070
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..227 6/21 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..280 4/18 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 344..365 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..466 15/84 (18%)
COG3899 426..>536 CDD:443106 31/109 (28%)
PTZ00112 <482..773 CDD:240274 101/329 (31%)
Necessary and sufficient for ORC complex assembly. /evidence=ECO:0000250 488..848 114/398 (29%)
Cdc6_C 765..844 CDD:462672 14/78 (18%)
Blue background indicates that the domain is not in the aligned region.

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