DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp66 and pdlim1

DIOPT Version :10

Sequence 1:NP_729395.2 Gene:Zasp66 / 38988 FlyBaseID:FBgn0035917 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001017870.1 Gene:pdlim1 / 550568 ZFINID:ZDB-GENE-030131-5227 Length:322 Species:Danio rerio


Alignment Length:399 Identity:75/399 - (18%)
Similarity:117/399 - (29%) Gaps:174/399 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EQNVGVQVGSP----AHGELLRGDIISKIGEYDARDLSHADAQQLFRGAGNEIRLVVHRDNKIAY 123
            ||.:.:...:|    |..:|..||:|..|.......::|.:||...:..|:|:.|.:.|..    
Zfish    24 EQPLTISRVTPGSKAAQADLCMGDMILAIDGESTDGMTHLEAQNKIKACGDEMALSIDRSE---- 84

  Fly   124 TQGATQEAGPGSRSNSTLPPVTPDLMPHRGPSPFLPGPSHFERALQLPVDTLPQTVFPQLNSSGG 188
                                                                             
Zfish    85 ----------------------------------------------------------------- 84

  Fly   189 YEVPSTVFSPKPTRDHQQDVDEEQAAIVNQPYRTTPLVLPGAKVKKDAPTTESYLRHYPNPAVRA 253
                |.::||..|.|.                :|.|..:..||.               |.....
Zfish    85 ----SKMWSPLVTEDG----------------KTNPYKMNLAKT---------------NTQEEK 114

  Fly   254 HPGHDYHDSIMKQRVADTMLHKVVGSEADTGRVFHKQFNSPIGLYSNNNIE------DTIRSTVP 312
            |.|..::.|.|....|             :.||...|:|:|.||||:.||:      |.:::|. 
Zfish   115 HIGSAHNRSAMPFNSA-------------SPRVVTNQYNNPAGLYSSENIKNFNSAVDEVQTTA- 165

  Fly   313 FATSESNRLKDSPLHRPLPTKLNGYKKTVQYD----------------PRNSETYRAIQE--EGG 359
             .:||::|..|       |:|....|..:..|                ||.|.:::.:||  |.|
Zfish   166 -TSSEASRNSD-------PSKPGHTKAAIAADSEVYKMLQENQESNEPPRQSASFKVLQEILETG 222

  Fly   360 YSN--YGQSSPQEVTIPVQTKVYQPNRLVPGKKPVSAPVSRPPYNVVNTHDE------------- 409
            .|.  .|..|.:..|..:...|..|.:|....|..|..|..    :|...|:             
Zfish   223 DSEKPSGFRSVKAPTTKIGASVGNPEKLSLCDKCGSGIVGM----IVKLRDKFRHPECYVCTDCG 283

  Fly   410 -NIRQSGSF 417
             |::|.|.|
Zfish   284 INLKQKGHF 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp66NP_729395.2 PDZ_canonical <68..117 CDD:483948 13/52 (25%)
DUF4749 285..374 CDD:464948 32/114 (28%)
pdlim1NP_001017870.1 PDZ_PDLIM-like 4..82 CDD:467235 15/57 (26%)
DUF4749 133..229 CDD:464948 29/104 (28%)
LIM_CLP36 253..304 CDD:188832 9/44 (20%)

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