DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp66 and Pdlim3

DIOPT Version :9

Sequence 1:NP_729395.2 Gene:Zasp66 / 38988 FlyBaseID:FBgn0035917 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_001361581.1 Gene:Pdlim3 / 53318 MGIID:1859274 Length:364 Species:Mus musculus


Alignment Length:423 Identity:90/423 - (21%)
Similarity:153/423 - (36%) Gaps:131/423 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PKPPLVPLPSPCRRRSSSGLKKRVHFADEQNVGVQVGS-PAHGELLRGDIISKIGEYDARDLSHA 98
            |:..::|.|:|...|.|.|:.........:   :..|| .|...|..||:|..|..:....::||
Mouse     2 PQNVVLPGPAPWGFRLSGGIDFNQPLVITR---ITPGSKAAAANLCPGDVILAIDGFGTESMTHA 63

  Fly    99 DAQQLFRGAGNEIRLVVHRDNKIAYTQGATQEAGPGSRSNSTLPPVTPDLMPHRGPSPFLPGPSH 163
            |||...:.|..::.|.:.|                 :.:....|.|:.|...|    ||      
Mouse    64 DAQDRIKAASYQLCLKIDR-----------------AETRLWSPQVSEDGKAH----PF------ 101

  Fly   164 FERALQLPVDTLPQTVFPQLNSSGGYEVPSTVFSPKPTRDHQQDVDEEQAAIVNQPYRTTPLVLP 228
                 ::.::..||.|              ..|      :|:.::            |..|.::|
Mouse   102 -----KINLEAEPQDV--------------NYF------EHKHNI------------RPKPFIIP 129

  Fly   229 GAKVKKDAPTTESYLRHYPNPAVRAHPGHDYHDSIM--------KQRVADTMLHKV-VGSEADTG 284
            |.......|:           .|....|.....|:.        ..:||..|...: :..|....
Mouse   130 GRTSGCSTPS-----------GVDCGSGRSTPSSVSTVSTICPGDLKVAAKMAPNIPLEMELPGV 183

  Fly   285 RVFHKQFNSPIGLYSNNNIEDTIRSTVPFATSESNRLKDSPLHRPLPTKLNGYKKTVQYD----- 344
            ::.|.|||:|:.|||::||.:|::..|..|..|::.:.:..  ..:|.:.:.|:  :.:|     
Mouse   184 KIVHAQFNTPMQLYSDDNIMETLQGQVATALGETSSMSEPT--ASVPPQSDVYR--MLHDNRDDP 244

  Fly   345 --PRNSETYRAIQEEGGYSNYG----QSSPQEVTIPVQTKVY----QPNRLVP-----GKKPVSA 394
              ||.|.::|.:|:   ..|.|    .:..:.|..|| |||:    ...|: |     |...|.|
Mouse   245 AAPRQSGSFRVLQD---LVNDGPDDRPAGTRSVRAPV-TKVHGGAGSAQRM-PLCDKCGSGIVGA 304

  Fly   395 PV-SRPPYNVVNTHDE---------NIRQSGSF 417
            .| :|..|.    |.|         |::|.|.|
Mouse   305 VVKARDKYR----HPECFVCADCNLNLKQKGYF 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp66NP_729395.2 PDZ_signaling <68..115 CDD:238492 15/47 (32%)
DUF4749 285..359 CDD:292558 22/80 (28%)
Pdlim3NP_001361581.1 PDZ_signaling 2..80 CDD:238492 22/80 (28%)
DUF4749 184..268 CDD:374237 24/90 (27%)
LIM_ALP 294..346 CDD:188834 12/44 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 70 1.000 Inparanoid score I5305
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24214
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.180

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