DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp66 and pdlim1

DIOPT Version :10

Sequence 1:NP_729395.2 Gene:Zasp66 / 38988 FlyBaseID:FBgn0035917 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_017950803.1 Gene:pdlim1 / 394527 XenbaseID:XB-GENE-1004691 Length:345 Species:Xenopus tropicalis


Alignment Length:355 Identity:64/355 - (18%)
Similarity:107/355 - (30%) Gaps:149/355 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VQVGSPAH-GELLRGDIISKIGEYDARDLSHADAQQLFRGAGNEIRLVVHRDNKIAYTQGATQEA 131
            |..||.|. .:|..||::..|...:...::|.:||...:|..:|:.|.::|              
 Frog    33 VMPGSKAAVADLCIGDVVISIDGENTDGMTHLEAQNKIKGCEDELILTINR-------------- 83

  Fly   132 GPGSRSNSTLPPVTPDLMPHRGPSPFLPGPSHFERALQLPVDTLPQTVFPQLNSSGGYEVPSTVF 196
                                                                       |.|.::
 Frog    84 -----------------------------------------------------------VESKIW 89

  Fly   197 SPKPTRDHQQDVDEEQAAIVNQPYRTTPLVLPGAKVKKDAPTTESYLRHYPNPAVRAHPGHDYHD 261
            ||..:.|.:.:           ||:                     :....||......|..::.
 Frog    90 SPLVSEDGKPN-----------PYK---------------------MNLASNPQELKQIGSAHNR 122

  Fly   262 SIMKQRVADTMLHKVVGSEADTGRVFHKQFNSPIGLYSNNNIED---------TIRSTVPFATSE 317
            |.|....|         |.:.|.:|...|:|:|.||||::|||:         |..:.||...||
 Frog   123 SAMPFTAA---------SASSTPKVITAQYNNPAGLYSSDNIENFNSALETKSTPSAQVPSKASE 178

  Fly   318 SNRLKDSPLHRPLPTKLNGYK-----KTVQYDPRNSETYRAIQE---------EGGYSNYGQSSP 368
            ..:..::   |.|..:...||     :.:...||.|.::..:||         ||....|     
 Frog   179 PTQPANT---RHLDKESEVYKMLQENQELDEPPRQSASFLVLQEILETDEKDFEGTECLY----- 235

  Fly   369 QEVTIPVQTKVYQPNRLVPGKKPVSAPVSR 398
               |.|::...........|.:.|.||.::
 Frog   236 ---TGPMERPFIDAGEKPSGFRSVRAPTTK 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp66NP_729395.2 PDZ_canonical <68..117 CDD:483948 14/49 (29%)
DUF4749 285..374 CDD:464948 29/111 (26%)
pdlim1XP_017950803.1 PDZ_PDLIM-like 5..83 CDD:467235 14/49 (29%)
DUF4749 137..225 CDD:464948 25/90 (28%)
LIM_CLP36 276..327 CDD:188832
Blue background indicates that the domain is not in the aligned region.

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