DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp66 and LHX6

DIOPT Version :9

Sequence 1:NP_729395.2 Gene:Zasp66 / 38988 FlyBaseID:FBgn0035917 Length:430 Species:Drosophila melanogaster
Sequence 2:XP_011516823.1 Gene:LHX6 / 26468 HGNCID:21735 Length:407 Species:Homo sapiens


Alignment Length:192 Identity:37/192 - (19%)
Similarity:66/192 - (34%) Gaps:61/192 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 ERAL-QLPVDTLPQTVFPQLNSSGGYEVPSTVFS-----PKPTRDHQQDVDEEQAAIVNQPYRTT 223
            |:.| ::..||:.:.:.....:..|..:...|.|     |||.:..:.....||..::.      
Human   206 EKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPAKRARTSFTAEQLQVMQ------ 264

  Fly   224 PLVLPGAKVKKDAPTTESYLRHYPNPAVRAHPGHDYHDSIMKQRVADT--MLHKVVGSEADTGRV 286
                  |:..:|           .||           |:...|::||.  :..:|:.......|.
Human   265 ------AQFAQD-----------NNP-----------DAQTLQKLADMTGLSRRVIQVWFQNCRA 301

  Fly   287 FHKQFN-----SPIGLYSN---NNIEDTIRSTVPFATSESNRLKDSPLHRPLPTKLNGYKKT 340
            .||:..     .|.|...:   :.:.|.|..| ||::.|..|:          ..|:||.:|
Human   302 RHKKHTPQHPVPPSGAPPSRLPSALSDDIHYT-PFSSPERARM----------VTLHGYIET 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp66NP_729395.2 PDZ_signaling <68..115 CDD:238492
DUF4749 285..359 CDD:292558 16/64 (25%)
LHX6XP_011516823.1 LIM1_Lhx6 99..152 CDD:188766
LIM2_Lhx6 160..214 CDD:188768 2/7 (29%)
Homeobox 252..304 CDD:278475 12/85 (14%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.030

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