DRSC/TRiP Functional Genomics Resources

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Protein Alignment Zasp66 and lim-4

DIOPT Version :9

Sequence 1:NP_729395.2 Gene:Zasp66 / 38988 FlyBaseID:FBgn0035917 Length:430 Species:Drosophila melanogaster
Sequence 2:NP_508669.1 Gene:lim-4 / 180672 WormBaseID:WBGene00002987 Length:355 Species:Caenorhabditis elegans


Alignment Length:122 Identity:27/122 - (22%)
Similarity:48/122 - (39%) Gaps:23/122 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 CRRRSSSG---------LKKRVHFAD--EQNVGVQVGSPAHGELLR----GDIISKIGEYDARDL 95
            |:|:.|:|         |..:.||.:  |.:.||. ...|..:.:|    .|.:|.:..|..|| 
 Worm   199 CKRQLSTGEEYALQEGNLLCKQHFLELVEGDSGVS-SQKAKTKRVRTTFAEDQLSVLQTYFNRD- 261

  Fly    96 SHADAQQL-----FRGAGNEIRLVVHRDNKIAYTQGATQEAGP-GSRSNSTLPPVTP 146
            |:.|...|     ..|....:..|..::::....:...:..|. |....|::.|.:|
 Worm   262 SNPDGADLEKIASMTGLSKRVTQVWFQNSRARQKKWHQKSEGDNGDSQRSSVGPSSP 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Zasp66NP_729395.2 PDZ_signaling <68..115 CDD:238492 12/55 (22%)
DUF4749 285..359 CDD:292558
lim-4NP_508669.1 LIM 98..153 CDD:278823
LIM2_AWH 168..222 CDD:188765 5/22 (23%)
HOX 239..295 CDD:197696 11/56 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R6207
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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