DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and GYP6

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_012491.3 Gene:GYP6 / 853406 SGDID:S000003580 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:360 Identity:67/360 - (18%)
Similarity:109/360 - (30%) Gaps:136/360 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DGDKVD----------------SGGVGL---------QDHPLSEGPESAWNTFFNDN-------- 126
            |||..|                |..||:         :.||||:..:....:....:        
Yeast    79 DGDNYDENHNANVPKRVLHSNVSSSVGIRRLTPVEAVEKHPLSDDNDKTKGSLSKGSDEKPLTLR 143

  Fly   127 EFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTK 191
            |.|..||.|:.|:..| ..||:|                                         |
Yeast   144 ETLEIIDLDLSRIMLD-DIFQEP-----------------------------------------K 166

  Fly   192 INLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTY 256
            ::...::.:.||..:.:.:...                   |.||.:||:..||..:....||. 
Yeast   167 VHAQMRQLLYNYLLIHQSEHLQ-------------------YKQGFHEILSVIYLQLYHGTDLD- 211

  Fly   257 RAHAEAD---CFFCFTALMSEIRDFFIKTLD----DAEGGIKFMMARLSNML-----------KS 303
                ..|   ....|..||::|...|....:    |.....|.....|.::.           ..
Yeast   212 ----NTDLQNVLIIFNKLMNQIEPIFYNEENLINWDKRVFTKIFRICLPDLFSKVFYQPPKTGSG 272

  Fly   304 KDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILI- 367
            |..::..|:.|..:    :..||..||..:|.||..||.:||.|.......|  |.|.|::|.: 
Yeast   273 KKKNVDHLIHSNLI----WLIRWTRLLFLRELPLKYVLIVWDHVLTFNYPLD--IFIACTIITLL 331

  Fly   368 ------QREAILENDFASN------VKLLQNYPPI 390
                  ..|.:.:.|:...      |:|:.::..|
Yeast   332 LSIYDELHELVSQGDYEHTNNNDEFVELILHFKKI 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 42/206 (20%)
GYP6NP_012491.3 TBC <145..336 CDD:214540 50/262 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001234
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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