DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and AT4G13730

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_193109.1 Gene:AT4G13730 / 827007 AraportID:AT4G13730 Length:449 Species:Arabidopsis thaliana


Alignment Length:413 Identity:161/413 - (38%)
Similarity:229/413 - (55%) Gaps:75/413 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKEFEDVLAGPQ-------DLIDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLA 65
            |...|||....|       .:||||:|||:|..|:||....|::.|||||.||.|.||.|::.||
plant    91 VSSVEDVSRKAQVVAELSKKVIDLKELRKIASQGLPDDAGIRSIVWKLLLDYLSPDRSLWSSELA 155

  Fly    66 QKRALYKQFIEELVLPPGHSSNRASVD-GGDGD--KVDSGG------VGLQDHPLSEGPESAWNT 121
            :||:.||||.|||::.|...:.:.... |||.:  |::|.|      :..:|||||.|..|.||.
plant   156 KKRSQYKQFKEELLMNPSEVTRKMDKSKGGDSNDPKIESPGALSRSEITHEDHPLSLGTTSLWNN 220

  Fly   122 FFNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKG 186
            ||.|.|.|.||::||.|..||:.||...:                                    
plant   221 FFKDTEVLEQIERDVMRTHPDMHFFSGDS------------------------------------ 249

  Fly   187 LGMTKINLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASD 251
                             |..:..|:|    ::.||.|:||||||..||||||||:.||:|:..:|
plant   250 -----------------AVAKSNQDA----LKNILTIFAKLNPGIRYVQGMNEILAPIFYIFKND 293

  Fly   252 PDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLR-SQ 315
            ||....|:||:|.||||..|||..||.|.:.||::..||::.:.|||.:||..|..::..|. :.
plant   294 PDKGNAAYAESDAFFCFVELMSGFRDNFCQQLDNSVVGIRYTITRLSLLLKHHDEELWRHLEVTT 358

  Fly   316 ELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFAD-EQRFDFLIKICCSMILIQREAILENDFAS 379
            :::||:|:|||:||||:|||...:.|.|||::.:| |...:.|::|||:|:::.|..:|..||.|
plant   359 KINPQFYAFRWITLLLTQEFNFVESLHIWDTLLSDPEGPQETLLRICCAMLILVRRRLLAGDFTS 423

  Fly   380 NVKLLQNYPPIDINVVIAHAGSL 402
            |:||||||||.:|:.::..|..|
plant   424 NLKLLQNYPPTNISHMLYVADKL 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 76/183 (42%)
AT4G13730NP_193109.1 RabGAP-TBC 229..417 CDD:278964 85/244 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 151 1.000 Domainoid score I1396
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10068
Inparanoid 1 1.050 300 1.000 Inparanoid score I786
OMA 1 1.010 - - QHG54276
OrthoDB 1 1.010 - - D683074at2759
OrthoFinder 1 1.000 - - FOG0001234
OrthoInspector 1 1.000 - - otm2964
orthoMCL 1 0.900 - - OOG6_102218
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4286
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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