DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d9b

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001277689.1 Gene:Tbc1d9b / 76795 MGIID:1924045 Length:1263 Species:Mus musculus


Alignment Length:283 Identity:61/283 - (21%)
Similarity:102/283 - (36%) Gaps:93/283 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 YPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEV 216
            |..|:|..|.|::.           |::..:||.          ..||:..:.|.:  .|.....
Mouse   535 YYAELVEKSLGKYS-----------LATEEIERD----------LHRSMPEHPAFQ--NELGIAA 576

  Fly   217 VQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSE-IRDFFI 280
            ::|:|..||..||..||.|.||.:...:         |.|.:..||  |:...||... :.|::.
Mouse   577 LRRVLTAYAFRNPTIGYCQAMNIVTSVL---------LLYGSEEEA--FWLLVALCERMLPDYYN 630

  Fly   281 KTLDDA--EGGI-----KFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRW-LTLLLSQEFPL 337
            ..:..|  :.||     :.::.|||.  |.::|.:...:          |..| |||.|| ..|.
Mouse   631 TRVVGALVDQGIFEELTRDVLPRLSE--KMQELGVISSI----------SLSWFLTLFLS-VMPF 682

  Fly   338 PDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILE-----NDFASNVKLLQNY---------- 387
            ...:.|.|..|.:.      ||:...:.|...:|.:|     ||....:.:|..|          
Mouse   683 ESAVVIVDCFFYEG------IKVILQVALAVLDANVEQLLDCNDEGEAMTVLGRYLDNVVNKQSI 741

  Fly   388 ----------------PPIDINV 394
                            ||:::::
Mouse   742 SPPIPHLHALLTSGDDPPVEVDI 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 46/190 (24%)
Tbc1d9bNP_001277689.1 PH-GRAM1_TCB1D9_TCB1D9B 153..251 CDD:275420
PH-GRAM2_TCB1D9_TCB1D9B 299..394 CDD:270161
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..449
TBC 506..716 CDD:214540 55/233 (24%)
EFh <856..907 CDD:298682
EFh 887..912 CDD:197492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 977..1002
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1075..1126
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1139..1159
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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