DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d30

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_030101194.1 Gene:Tbc1d30 / 74694 MGIID:1921944 Length:909 Species:Mus musculus


Alignment Length:242 Identity:53/242 - (21%)
Similarity:96/242 - (39%) Gaps:54/242 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   180 ANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWE--VVQRILFIYAKLNPGQGYVQGMNEIVG 242
            :|.:...:|:..:..:.:....:|.    ||||..:  |::|:|..||:.|...||.||.|.:..
Mouse   247 SNPDDDSMGIQIVKDLHRTGCSSYC----GQEAEQDRVVLKRVLLAYARWNKNVGYCQGFNILAA 307

  Fly   243 PIYYVMASDPDLTYRAHAEADCFFCFTALMSEI--RDFFIKTLDDAEGGIKFMMARLSNMLK--- 302
            .|..||..:         |.|.......|:.::  ..:|:..|    ..:...||...::|:   
Mouse   308 LILEVMEGN---------EGDALKIMIYLIDKVLPESYFVNNL----RALSVDMAVFRDLLRLKL 359

  Fly   303 ---SKDLSIYELLRSQELHPQY-------YSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFL 357
               |:.|...:...::|....|       ::.:|...|.:...|...||:||||||.:.......
Mouse   360 PELSQHLDTLQRTANKESGGGYEPPLTNVFTMQWFLTLFATCLPNHTVLKIWDSVFFEGSEIILR 424

  Fly   358 IKI-----------CC--------SMILIQREAILENDFASNVKLLQ 385
            :.:           ||        :|..:.:| :||.|...:.:|:|
Mouse   425 VSLAIWAKLGEQIECCETADEFYGTMGRLTQE-MLEQDLLQSHELMQ 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 46/217 (21%)
Tbc1d30XP_030101194.1 TBC 208..429 CDD:214540 44/198 (22%)
DUF4682 598..746 CDD:374060
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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