DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d21

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_083130.1 Gene:Tbc1d21 / 74286 MGIID:1921536 Length:336 Species:Mus musculus


Alignment Length:303 Identity:52/303 - (17%)
Similarity:108/303 - (35%) Gaps:86/303 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ESAWNTFFNDNEFLLQIDKDV-------RRLCPDI---------SFFQQPTDYPCEIVVHSKGEH 164
            ::.|::||::|..|.: .:|.       |.|.|.:         .::...:.....::|.|....
Mouse    29 KAEWDSFFDENGHLAK-SRDFICINILERGLHPFVRTEAWKFLTGYYSWQSSRDERLMVDSNRRR 92

  Fly   165 GR----RLHERVVPAV-------LSSAN---------VERKGLGMTKINLITKRSVENYAAMEEG 209
            ..    :::|::.|.:       ..:.|         .::..||..   ||.|:.:|        
Mouse    93 NYNSLCQMYEKIQPLLENLHGNFTETRNNIAYDIQRLYDKDPLGNV---LIDKKKLE-------- 146

  Fly   210 QEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSE 274
                    :.:|..|. .|....|.:|.:|:| .::.:|...         :.:.|:.|...:.:
Mouse   147 --------KTLLLSYV-CNTKAEYQRGFHEMV-MLFQLMVEH---------DHETFWLFQFFLQK 192

  Fly   275 IRDFFI------KTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQ 333
            .....:      |.||.....|..:....:..||.|.....:.|           |.|..|...:
Mouse   193 TEHSCVINIGVGKNLDMLNSLITLLDPEFAEHLKGKGSGAVQSL-----------FPWFCLCFQR 246

  Fly   334 EF-PLPDVLRIWDSVFADEQRFDFLIKICCSMI-LIQREAILE 374
            .| ...||.|:|:.:...:...:|.:.:..||: :::.:|:||
Mouse   247 AFKTFDDVWRLWEVLLTGKPCRNFQVLVAYSMLQMVREQALLE 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 34/189 (18%)
Tbc1d21NP_083130.1 TBC 62..287 CDD:214540 40/265 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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