DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and tbc1d2b

DIOPT Version :10

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_012822167.2 Gene:tbc1d2b / 734055 XenbaseID:XB-GENE-5932742 Length:944 Species:Xenopus tropicalis


Alignment Length:443 Identity:80/443 - (18%)
Similarity:176/443 - (39%) Gaps:99/443 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKEFEDVLAG--------PQDLIDLKQLRKLAFNGVPDVQ----SFRALSWKLLLGYLGPRRSSW 60
            :...:|.|.|        .:::::|..||:.|.....:::    :..|...::...||...:...
 Frog   466 LNRLQDSLQGYKAQNTFLNKEILELSALRRNAERREREMEARYSNLEAKMCQIESKYLVLLQEMK 530

  Fly    61 TTTLAQKRALYKQFIEELV----------------LPPGHSSNRASVDG-----GDGDKVDS--- 101
            |...:..:...::|:.:|:                :.| |:.::..:.|     .|.::.:.   
 Frog   531 TPVCSDDQGTAREFVNQLLEDALKVENAEQPEHTFVKP-HTVSKYDIHGFLIVPEDDEEEEKLVA 594

  Fly   102 --GGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLC-PDISFFQQ---PTDYPCEIVVHS 160
              ..:.|:...|:|..|.: |....||.|...:::::  .| |::....:   |.::...:....
 Frog   595 KVRALDLKTLSLTENQEIS-NVVKWDNYFASTVNREM--ACSPELKALVRNGIPHEHRSRMWKWF 656

  Fly   161 KGEHGRRLHERVVP----AVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVVQRIL 221
            ...|.::|.:...|    ::|.:| :|::.....:|.|...|::.|............:.::.:|
 Frog   657 TNLHIKKLKDEAAPGYFQSLLQNA-LEKQNPASKQIELDLMRTLPNNKHYTSPTSEGIQKLRNVL 720

  Fly   222 FIYAKLNPGQGYVQGMNEIVG-PIYYVMASDPDLTYRAHAEADCFFCFTALMSEI--RDFFIKTL 283
            ..|:..||..||.||:|.:.. .:.|:            .:.|.|:|...::...  ||::.|||
 Frog   721 LAYSWRNPDIGYCQGINRLAAIALLYL------------DQEDAFWCLVTIVEAFMPRDYYTKTL 773

  Fly   284 DDAEGGIKFMMARLSNMLKSKDLSIYELLRSQEL-----HPQYY-------SFRWLTLLLSQEFP 336
                         |.:.:   |..:::.|.:::|     |.:.|       :|.|. |::..:..
 Frog   774 -------------LGSQV---DQRVFKDLMNEKLPRLCAHFEQYKVDYTLITFNWF-LVVFVDSV 821

  Fly   337 LPDVL-RIWDSVFADEQRFDFLIKICCSMILIQREAILE-NDFASNVKLLQNY 387
            :.|:| |||||:..:..:..|  :....:...:.|.||: .|..|..|.|:.:
 Frog   822 VSDILFRIWDSLLYEGSKVIF--RFALGLFKYKEEEILKLQDSMSIFKYLRYF 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 40/197 (20%)
tbc1d2bXP_012822167.2 PH_TBC1D2A 34..134 CDD:269966
Smc 322..>560 CDD:440809 13/93 (14%)
TBC 640..857 CDD:214540 47/248 (19%)
Blue background indicates that the domain is not in the aligned region.

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