DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and tbc1d14

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_005166496.1 Gene:tbc1d14 / 557744 ZFINID:ZDB-GENE-030131-6136 Length:711 Species:Danio rerio


Alignment Length:411 Identity:89/411 - (21%)
Similarity:141/411 - (34%) Gaps:129/411 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSW--KLLLGYLGPRRSSWTTTLA 65
            :.:|:.:|.:|.....:.|.|..:|.:...|.        ||:|  ::|        .:|.:..:
Zfish   361 VAQAKKRELKDAQKRKKQLEDRCKLEESIGNA--------ALTWSQEIL--------PNWQSMCS 409

  Fly    66 QKRA--LYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVG--------LQDHPLSEGPESAWN 120
            .||.  |:.|     .|||       ||.|    ||.|..:|        |.|..|:...|. ||
Zfish   410 SKRVRDLWWQ-----GLPP-------SVRG----KVWSLAIGNELNITDELYDICLARAKEK-WN 457

  Fly   121 TFFNDNEFLLQIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERK 185
            .|.                        .||     ..|.::.|          .|.||.|:.| .
Zfish   458 AFV------------------------APT-----AAVETESE----------DAGLSHADRE-A 482

  Fly   186 GLGMTKINLITKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMAS 250
            .|.:.|:::  .|:..|....::|...| :|:..||..|....|..||||||:.|..    |:..
Zfish   483 SLELIKLDI--SRTFPNLCIFQKGGPYH-DVLHSILGAYTCYRPDVGYVQGMSFIAA----VLIL 540

  Fly   251 DPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDA-------------EGGIKFMMARLSNMLK 302
            :.|       .||.|..|..|:::........:|.:             |..:..:.|...|...
Zfish   541 NLD-------TADAFIAFANLLNKPCQMAFYRVDHSLMLTYFAAFEVFFEENLPKLFAHFKNNNL 598

  Fly   303 SKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILI 367
            |.|:               |...|:..|.|:..||....|:||....|.:  :||.:....::.:
Zfish   599 SSDI---------------YLIDWIFTLYSKSLPLDIACRVWDVFCRDGE--EFLFRTALGILRL 646

  Fly   368 QREAILENDFASNVKLLQNYP 388
            ..:.:...||....:.|...|
Zfish   647 YEDILTHMDFIHIAQFLTRLP 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 42/194 (22%)
tbc1d14XP_005166496.1 COG5210 293..656 CDD:227535 85/398 (21%)
RabGAP-TBC 485..651 CDD:278964 42/196 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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