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Protein Alignment GAPsec and grtp1b
DIOPT Version :9
Sequence 1: | NP_648245.2 |
Gene: | GAPsec / 38987 |
FlyBaseID: | FBgn0035916 |
Length: | 403 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001017810.1 |
Gene: | grtp1b / 550508 |
ZFINID: | ZDB-GENE-050417-346 |
Length: | 349 |
Species: | Danio rerio |
Alignment Length: | 191 |
Identity: | 45/191 - (23%) |
Similarity: | 80/191 - (41%) |
Gaps: | 19/191 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 201 ENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCF 265
:|.......|....:.:..:|..|...|...||.||||.|.| |::....| |...|
Zfish 133 DNIQFRHSSQSCLQKALFNVLLAYGHHNKDVGYCQGMNFIAG---YLLIITKD-------EEKSF 187
Fly 266 FCFTALMSEI-RDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTL 329
:...||:..| .|::.:|: .|:|.....|..::|||..::::.:...::.......||...
Zfish 188 WLMVALIGRILPDYYTQTM----LGLKVDQEVLGELVKSKVPAVWQTMNQHDVMWTLVVSRWFIC 248
Fly 330 LLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASNVKLLQNYPPI 390
|.....|:..||||||.:|.:..:..|.: ::.||:....|.:...|..::.:.:..|
Zfish 249 LYVDVLPVETVLRIWDCLFYEGSKILFRV----ALTLIRHNQNLISQAKSLPEICEGFKQI 305
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GAPsec | NP_648245.2 |
TBC |
<191..373 |
CDD:214540 |
42/172 (24%) |
grtp1b | NP_001017810.1 |
TBC |
76..289 |
CDD:214540 |
42/173 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5210 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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