DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and TBC1D13

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_060671.3 Gene:TBC1D13 / 54662 HGNCID:25571 Length:400 Species:Homo sapiens


Alignment Length:405 Identity:209/405 - (51%)
Similarity:281/405 - (69%) Gaps:15/405 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQ 66
            |:.|:|:.:|:|||..|.  |.|::||:|:|:|:|.....|.|.||:||.||...|:|||:.||:
Human     3 SLHKSRIADFQDVLKEPS--IALEKLRELSFSGIPCEGGLRCLCWKILLNYLPLERASWTSILAK 65

  Fly    67 KRALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQ 131
            :|.||.||:.|:::.||.:.....|...|        |..:||||:..|:|.|||:|.|||.|||
Human    66 QRELYAQFLREMIIQPGIAKANMGVSRED--------VTFEDHPLNPNPDSRWNTYFKDNEVLLQ 122

  Fly   132 IDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLIT 196
            ||||||||||||||||:.|||||.:::..:.|. ..|.:||....|.|..|.|...|:|.::...
Human   123 IDKDVRRLCPDISFFQRATDYPCLLILDPQNEF-ETLRKRVEQTTLKSQTVARNRSGVTNMSSPH 186

  Fly   197 KRSV----ENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYR 257
            |.||    ..|..:..|.|||||||:||||||||||||..|||||||||||:||..|:||:..::
Human   187 KNSVPSSLNEYEVLPNGCEAHWEVVERILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWK 251

  Fly   258 AHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYY 322
            .|||||.|||||.||:||||.|||:|||::.||.:.|.::.:.||.||:.:|..|:.|.:.||::
Human   252 EHAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIKPQFF 316

  Fly   323 SFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASNVKLLQNY 387
            :||||||||||||.||||:|||||:|||:.|||||:.:||:|:::.||.:||.||..|::|||:|
Human   317 AFRWLTLLLSQEFLLPDVIRIWDSLFADDNRFDFLLLVCCAMLMLIREQLLEGDFTVNMRLLQDY 381

  Fly   388 PPIDINVVIAHAGSL 402
            |..|:..::..|..|
Human   382 PITDVCQILQKAKEL 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 108/185 (58%)
TBC1D13NP_060671.3 TBC 32..367 CDD:214540 182/343 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 220 1.000 Domainoid score I2639
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10068
Inparanoid 1 1.050 420 1.000 Inparanoid score I1802
Isobase 1 0.950 - 0 Normalized mean entropy S2189
OMA 1 1.010 - - QHG54276
OrthoDB 1 1.010 - - D350831at33208
OrthoFinder 1 1.000 - - FOG0001234
OrthoInspector 1 1.000 - - oto90861
orthoMCL 1 0.900 - - OOG6_102218
Panther 1 1.100 - - LDO PTHR22957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1952
SonicParanoid 1 1.000 - - X4286
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.820

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