DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d8

DIOPT Version :10

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_017177250.1 Gene:Tbc1d8 / 54610 MGIID:1927225 Length:1160 Species:Mus musculus


Alignment Length:277 Identity:60/277 - (21%)
Similarity:98/277 - (35%) Gaps:85/277 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 SEGPE----------SAWNTFFND---NEFLLQIDKDVRRL----CPD-------ISFFQQPTDY 152
            |:.|:          |.||..|.:   ...:.:.:| :|:|    .|:       :.|....|| 
Mouse   476 SQSPDSRLSREQIKISLWNDHFVEYGRTVCMFRTEK-IRKLVAMGIPESLRGRLWLLFSDAVTD- 538

  Fly   153 PCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVV 217
                :....|.:|..:.:.:....|.:..:||.          ..||:..:.|.:  .|.....:
Mouse   539 ----LASHPGYYGNLVEQSLGRCCLVTEEIERD----------LHRSLPEHPAFQ--NETGIAAL 587

  Fly   218 QRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSE-IRDFFIK 281
            :|:|..||..||..||.|.||.:...:         |.|....||  |:...|:... :.|:|..
Mouse   588 RRVLTAYAHRNPKIGYCQSMNILTSVL---------LLYAKEEEA--FWLLVAVCERMLPDYFNH 641

  Fly   282 TLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQY------------YSFRW-LTLLLSQ 333
            .:..|:                .|.|::|.|..::| |:.            .|..| |||.|| 
Mouse   642 RVIGAQ----------------VDQSVFEELIKEQL-PELAEHMSDLSALASISLSWFLTLFLS- 688

  Fly   334 EFPLPDVLRIWDSVFAD 350
            ..||...:.:.|..|.|
Mouse   689 IMPLESAVHVVDCFFYD 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 42/174 (24%)
Tbc1d8XP_017177250.1 PH-GRAM1_TBC1D8 171..269 CDD:270156
PH-GRAM2_TBC1D8 311..406 CDD:270160
TBC 519..725 CDD:214540 51/233 (22%)
Blue background indicates that the domain is not in the aligned region.

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