DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and tbc1d15

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_005159143.1 Gene:tbc1d15 / 492676 ZFINID:ZDB-GENE-041111-251 Length:665 Species:Danio rerio


Alignment Length:392 Identity:87/392 - (22%)
Similarity:158/392 - (40%) Gaps:115/392 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QDL----IDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALYKQFIEELV 79
            |||    .:|..|:...|.| ....:.|..:||.||||.     .|::|..:::.|.|:..:|..
Zfish   305 QDLEGRMTNLPHLKDAIFKG-GLCHAVRKEAWKFLLGYF-----PWSSTHEERKLLQKRKTDEYF 363

  Fly    80 LPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDIS 144
                                   .:.||...:||..|.. |:...|...|  |:|||.|...:..
Zfish   364 -----------------------RMKLQWKSVSEEQERR-NSRLRDYRSL--IEKDVNRTDRNNK 402

  Fly   145 FFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEG 209
            |: :..|.|..|::|.                                                 
Zfish   403 FY-EGLDNPGLILLHD------------------------------------------------- 417

  Fly   210 QEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSE 274
                      ||..|...:...||||||::::.||.:||.:          |.|.|:||.:.|.|
Zfish   418 ----------ILMTYCMYDFDLGYVQGMSDLLSPILFVMEN----------EVDAFWCFVSFMDE 462

  Fly   275 IRDFFIKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPD 339
            :.:.|    ::...|:|..:.:||.:|:..||:.:..|.:|:....|:.||||.:...:|....|
Zfish   463 MHENF----EEQMQGMKTQLIQLSTLLRLLDLAFWNYLEAQDSGYLYFCFRWLLIRFKRELHFQD 523

  Fly   340 VLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASNVKLLQNY----PPIDINVVIAHAG 400
            |||:|:.::......:|.:.:||:::..:::.|::..:..| ::|::.    ..:||..:::.:.
Zfish   524 VLRLWEVMWTRLPCQNFHLLVCCAILDSEKQKIMDRKYGFN-EILKHINELSMKLDIEEILSKSE 587

  Fly   401 SL 402
            |:
Zfish   588 SI 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 44/181 (24%)
tbc1d15XP_005159143.1 DUF3548 4..220 CDD:192931
TBC 322..557 CDD:214540 76/340 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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