DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and CG12241

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_650432.1 Gene:CG12241 / 41834 FlyBaseID:FBgn0038304 Length:804 Species:Drosophila melanogaster


Alignment Length:392 Identity:73/392 - (18%)
Similarity:124/392 - (31%) Gaps:147/392 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 KQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSSNRA 89
            ::||.:...|:|  .:.||..|..|.|.|..::.|.|:.                    |...:|
  Fly   155 EKLRNMVRQGIP--HTLRAQMWMRLSGALAKKQKSETSY--------------------HDIVKA 197

  Fly    90 SVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLL---QIDKDVRRLCPDISFFQQPTD 151
            |                                  .|:.|:   ||:||:.|:.|..:.|..|  
  Fly   198 S----------------------------------SNDQLMTSKQIEKDLLRILPTNACFSNP-- 226

  Fly   152 YPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEV 216
                                             .|.|:.::                        
  Fly   227 ---------------------------------NGTGIPRL------------------------ 234

  Fly   217 VQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEI--RDFF 279
             :|||...|.|.|..||.||...||..:...|           .|.:.|:....::.::  ..::
  Fly   235 -RRILRGIAWLFPDIGYCQGTGVIVACLLLFM-----------EEENAFWMMATIVEDLLPASYY 287

  Fly   280 IKTLDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIW 344
            ..||...:...:.|...::|.|.|.|    |.||..::.....:..|...|.:....:..::|||
  Fly   288 SSTLLGIQADQRVMHTLIANYLSSVD----ESLRKHDIELSLITLHWFLTLFANVVHMKILVRIW 348

  Fly   345 DSVFADEQRFDFLIKICCSMILIQREAI--LENDFASNVKLLQNYP--PIDINVVIAHA----GS 401
            |..|.:..  ..|.::...|:.::.:.:  |||. |.....|.:.|  ..|:.|:...|    ||
  Fly   349 DWFFYEGS--IVLFQLTLGMLKVKEQDLKHLENS-AQIFNSLSDIPGEVTDVEVLFRQALEVGGS 410

  Fly   402 LA 403
            |:
  Fly   411 LS 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 34/185 (18%)
CG12241NP_650432.1 TBC 161..375 CDD:214540 59/346 (17%)
SH3_SGSM3 540..592 CDD:212747
RUN 619..773 CDD:280855
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456579
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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