DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d10c

DIOPT Version :10

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001075449.1 Gene:Tbc1d10c / 361697 RGDID:1311490 Length:446 Species:Rattus norvegicus


Alignment Length:378 Identity:72/378 - (19%)
Similarity:118/378 - (31%) Gaps:153/378 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 QLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKR--ALYKQFIEELVLPPGHSSNR 88
            |.||    |:|  .:.||..|.||.|          ..:.||.  ..|    :||.:.||     
  Rat    88 QCRK----GIP--SALRARCWPLLCG----------AHMCQKNNPGTY----QELAVAPG----- 127

  Fly    89 ASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPTDYP 153
                                                |.:::..|.:|:.|..|            
  Rat   128 ------------------------------------DPQWMETIGRDLHRQFP------------ 144

  Fly   154 CEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVVQ 218
                          |||..|                              :....||:.    :.
  Rat   145 --------------LHEMFV------------------------------SPQGHGQQG----LL 161

  Fly   219 RILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMS-EIRDFFIKT 282
            ::|..|....|.|||.|..    ||:..|:     |.:....||  |:|...:.. .:..::...
  Rat   162 QVLKAYTLYRPEQGYCQAQ----GPVAAVL-----LMHLPPEEA--FWCLVQICEVYLPGYYGPH 215

  Fly   283 LDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSV 347
            ::..:...:..||.|..:|.    .:|:.|:...:.|..|...|...|.::..|.|.||||||:.
  Rat   216 MEAVQLDAEVFMALLRRLLP----RVYKHLQQVGVGPLLYLPEWFLCLFTRSLPFPIVLRIWDAF 276

  Fly   348 FADEQRFDF-----LIKICCSMILIQREA---ILENDFASNVKLLQNYPPIDI 392
            .::..:..|     |:::....: .||.|   :||     .:..|:..||..:
  Rat   277 LSEGAKVLFRAGLTLMRLALGTV-EQRTACPGLLE-----TLGALRTIPPTQL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 40/190 (21%)
Tbc1d10cNP_001075449.1 TBC 89..294 CDD:214540 63/340 (19%)

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