DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d15-17

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_001259806.1 Gene:Tbc1d15-17 / 33184 FlyBaseID:FBgn0031233 Length:715 Species:Drosophila melanogaster


Alignment Length:381 Identity:77/381 - (20%)
Similarity:133/381 - (34%) Gaps:119/381 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 DLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSSN 87
            |..::::|.|.| ..|||.|...||.||.|.     .|:.|..::....||              
  Fly   360 DSARIKELIFRG-GVVQSLRPEVWKFLLNYY-----LWSDTHVERIERRKQ-------------- 404

  Fly    88 RASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPTDY 152
                     ..::...:..|...::...|:   .|....|...||:|||:|....:.||      
  Fly   405 ---------KSIEYYNMKAQWLAMTTTQEA---NFCGYRERKCQIEKDVKRTDRSLQFF------ 451

  Fly   153 PCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHWEVV 217
                    .||....|                                              .::
  Fly   452 --------AGEDNPNL----------------------------------------------TLL 462

  Fly   218 QRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKT 282
            |.||..|...|...||||||::::.||..:..:          |.|.|:||...|    :.....
  Fly   463 QGILMTYVMYNFDLGYVQGMSDLLAPILEIQVN----------EVDTFWCFVGFM----ELVFTN 513

  Fly   283 LDDAEGGIKFMMARLSNMLKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSV 347
            .|..:.|:|...|::..:::..:..::..:||.:....|:.||||.:...:|....|||::|:.:
  Fly   514 FDIDQAGMKTQFAQIRRLIEFANAPLFNYMRSHDSDNMYFCFRWLLVWYKRELNSEDVLKLWECL 578

  Fly   348 FADEQRFDFLIKICCSMILIQREAILENDFASNVKLLQNYPPIDINVVIAHAGSLA 403
            :.   |..     |.:..|:...|||:.:  :.|.:...|   :...::.|...|:
  Fly   579 WT---RLP-----CPNFHLLFSVAILDQE--TRVIIDSQY---EFTEILKHVNELS 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 39/181 (22%)
Tbc1d15-17NP_001259806.1 DUF3548 37..>191 CDD:192931
TBC 369..598 CDD:214540 71/342 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456558
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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