DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GAPsec and CG1695

DIOPT Version :10

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster


Alignment Length:357 Identity:75/357 - (21%)
Similarity:139/357 - (38%) Gaps:77/357 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PRRSSWTTTLAQKRALYKQFIEELVLPPG-----HSSNRASVDGGDGDKVDSGGV---------- 104
            |..||:.|...:...:.:..:|| ..|||     ||::...:|..|.::......          
  Fly   852 PSTSSYETVGNEFLDMAEAKLEE-EEPPGQLSKFHSADDVRLDNQDEEESSQPATAVIITEAASL 915

  Fly   105 -GLQDHPLSEGPESAWNTFFNDNEFLLQ-IDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRR 167
             .|.|.|..|        |.:....|:. :::|: .:...:...|:|.. .|.....|.|     
  Fly   916 DALDDDPTEE--------FTSRKTSLMSPLNEDI-TVVASLDALQEPKS-ACVSPASSNG----- 965

  Fly   168 LHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHW-------EVVQRILFIYA 225
                   .|.|...:|:.||.:.:|....:|...||          |       :.::.::..|.
  Fly   966 -------GVYSVELLEQFGLNLHRIEKDVQRCDRNY----------WYFANENLDKLRNVISTYV 1013

  Fly   226 KLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGI 290
            ..:...||:|||.::|.|: .|:..|..|:|.         ||..||..:.:.|     .:.|.:
  Fly  1014 WEHLDVGYMQGMCDLVAPL-LVIFDDESLSYS---------CFCKLMERMIENF-----PSGGAM 1063

  Fly   291 KFMMARLSNMLKSKDLSIYELLRSQELHPQ-YYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQ-- 352
            ....|.:.::::..|..:|:|:.|...:.. |:.:||..|...:|....||...|:.::|.:.  
  Fly  1064 DMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIA 1128

  Fly   353 RFDFLIKICCSMILIQREAILEN--DFASNVK 382
            ...|::.:..:::...|:.||.|  ||...:|
  Fly  1129 SGHFVLFLALALLETYRDIILSNSMDFTDVIK 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 39/191 (20%)
CG1695NP_728346.2 RUN_SGSM1_like 39..233 CDD:439049
PH_RUTBC 310..485 CDD:275431
TBC 947..1124 CDD:214540 46/214 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.