DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and CG1695

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_728346.2 Gene:CG1695 / 33046 FlyBaseID:FBgn0031116 Length:1192 Species:Drosophila melanogaster


Alignment Length:357 Identity:75/357 - (21%)
Similarity:139/357 - (38%) Gaps:77/357 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 PRRSSWTTTLAQKRALYKQFIEELVLPPG-----HSSNRASVDGGDGDKVDSGGV---------- 104
            |..||:.|...:...:.:..:|| ..|||     ||::...:|..|.::......          
  Fly   852 PSTSSYETVGNEFLDMAEAKLEE-EEPPGQLSKFHSADDVRLDNQDEEESSQPATAVIITEAASL 915

  Fly   105 -GLQDHPLSEGPESAWNTFFNDNEFLLQ-IDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRR 167
             .|.|.|..|        |.:....|:. :::|: .:...:...|:|.. .|.....|.|     
  Fly   916 DALDDDPTEE--------FTSRKTSLMSPLNEDI-TVVASLDALQEPKS-ACVSPASSNG----- 965

  Fly   168 LHERVVPAVLSSANVERKGLGMTKINLITKRSVENYAAMEEGQEAHW-------EVVQRILFIYA 225
                   .|.|...:|:.||.:.:|....:|...||          |       :.::.::..|.
  Fly   966 -------GVYSVELLEQFGLNLHRIEKDVQRCDRNY----------WYFANENLDKLRNVISTYV 1013

  Fly   226 KLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGI 290
            ..:...||:|||.::|.|: .|:..|..|:|.         ||..||..:.:.|     .:.|.:
  Fly  1014 WEHLDVGYMQGMCDLVAPL-LVIFDDESLSYS---------CFCKLMERMIENF-----PSGGAM 1063

  Fly   291 KFMMARLSNMLKSKDLSIYELLRSQELHPQ-YYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQ-- 352
            ....|.:.::::..|..:|:|:.|...:.. |:.:||..|...:|....||...|:.::|.:.  
  Fly  1064 DMHFANMRSLIQILDSEMYDLMDSNGDYTHFYFCYRWFLLDFKRELVYDDVFATWEVIWAAKHIA 1128

  Fly   353 RFDFLIKICCSMILIQREAILEN--DFASNVK 382
            ...|::.:..:::...|:.||.|  ||...:|
  Fly  1129 SGHFVLFLALALLETYRDIILSNSMDFTDVIK 1160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 39/191 (20%)
CG1695NP_728346.2 RUN 63..237 CDD:280855
PH_RUTBC 310..485 CDD:275431
SRP68-RBD <648..>713 CDD:304552
TBC 947..1124 CDD:214540 46/214 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456575
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR22957
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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