DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and TBC1D28

DIOPT Version :10

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:XP_016879905.1 Gene:TBC1D28 / 254272 HGNCID:26858 Length:350 Species:Homo sapiens


Alignment Length:217 Identity:40/217 - (18%)
Similarity:74/217 - (34%) Gaps:87/217 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IDLKQLRKLAFNGVPDVQSFRALSWKLLLGYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSS 86
            :::||.||         :|.|...|:.:|       :.||...:.|: |.::..:  |:|     
Human   104 LEVKQRRK---------ESKRTNKWQKML-------ADWTKYRSTKK-LSQRVCK--VIP----- 144

  Fly    87 NRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPTD 151
                             :.::...||               .||.||| ::.        |.|..
Human   145 -----------------LAVRGRALS---------------LLLDIDK-IKS--------QNPGK 168

  Fly   152 YPCEIVVHSKGEHGRRLHERVVPAVLSSAN-----VERKGLGMTKI-NLITKRSVENYAAM---- 206
            |.   |:..||:...|:...:...|..:..     ::|.|:...:: :::...|..|.||:    
Human   169 YK---VMKEKGKRSSRIIHCIQLDVSHTLQKHMMFIQRFGVKQQELCDILVAYSAYNPAALGLLQ 230

  Fly   207 EEGQ---------EAHWEVVQR 219
            :.||         .:.|.|..|
Human   231 DRGQFLVLLKSPGPSDWRVTSR 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 9/43 (21%)
TBC1D28XP_016879905.1 COG5210 2..>230 CDD:227535 35/193 (18%)
TBC 143..>224 CDD:214540 20/129 (16%)

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