DRSC/TRiP Functional Genomics Resources

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Protein Alignment GAPsec and Tbc1d12

DIOPT Version :9

Sequence 1:NP_648245.2 Gene:GAPsec / 38987 FlyBaseID:FBgn0035916 Length:403 Species:Drosophila melanogaster
Sequence 2:NP_666064.3 Gene:Tbc1d12 / 209478 MGIID:2384803 Length:698 Species:Mus musculus


Alignment Length:398 Identity:79/398 - (19%)
Similarity:128/398 - (32%) Gaps:133/398 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLLG-YLGPRRSSWTTTLA 65
            ||..|.|....::|...:.:...:::|:|.:.|:|  .|.|...|.|.:| .|......:...|:
Mouse   375 SIASAMVIWINEILPNWEVMRSTRRVRELWWQGLP--PSVRGKVWSLAVGNELNITPELYEIFLS 437

  Fly    66 QKRALYKQFIEELVLPPGHSSNRASVDGGDGDKVDSGGVGLQDHPLSEGPESAWNTFFNDNEFLL 130
            :.:..:|.|.|      ..|.|            |:.|:.:.|...|                |.
Mouse   438 RAKERWKSFSE------SSSEN------------DTEGLSVADREAS----------------LE 468

  Fly   131 QIDKDVRRLCPDISFFQQPTDYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLI 195
            .|..|:.|..|.:..||:...|                                           
Mouse   469 LIKLDISRTFPSLYIFQKGGPY------------------------------------------- 490

  Fly   196 TKRSVENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMASDPDLTYRAHA 260
                             | :|:..||..|....|..||||||:.|...:...:           .
Mouse   491 -----------------H-DVLHSILGAYTCYRPDVGYVQGMSFIAAVLILNL-----------E 526

  Fly   261 EADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNMLK---------SKDLS-IYELLRSQ 315
            |||.|..|..|:::            ...:.|.....|.|||         .::|| ::...:|.
Mouse   527 EADAFIAFANLLNK------------PCQLAFFRVDHSMMLKYFATFEVFFEENLSKLFLHFKSY 579

  Fly   316 ELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFADEQRFDFLIKICCSMILIQREAILENDFASN 380
            .|.|..|...|:..|.|:..||....|:||....|.:  :||.:....::.:..:.:|:.||...
Mouse   580 NLTPDIYLIDWIFTLYSKSLPLDLACRVWDVFCRDGE--EFLFRTGLGILRLYEDILLQMDFIHI 642

  Fly   381 VKLLQNYP 388
            .:.|...|
Mouse   643 AQFLTKLP 650

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GAPsecNP_648245.2 TBC <191..373 CDD:214540 41/191 (21%)
Tbc1d12NP_666064.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..59
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..123
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 158..236
COG5210 304..639 CDD:227535 75/385 (19%)
RabGAP-TBC 468..635 CDD:278964 48/252 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5210
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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